Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC72_RS07950 Genome accession   NZ_CP054570
Coordinates   1654089..1655846 (-) Length   585 a.a.
NCBI ID   WP_002896472.1    Uniprot ID   A0A859EP38
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649089..1660846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS07930 (FOC72_07930) - 1650066..1650770 (-) 705 WP_002896467.1 cobalt-precorrin-8 methylmutase -
  FOC72_RS07935 (FOC72_07935) - 1650771..1651469 (-) 699 WP_002896469.1 cobalt-precorrin-8 methylmutase -
  FOC72_RS07940 (FOC72_07940) cbiB 1651479..1652429 (-) 951 WP_002896470.1 adenosylcobinamide-phosphate synthase CbiB -
  FOC72_RS07945 (FOC72_07945) - 1652431..1653789 (-) 1359 WP_002896471.1 cobyrinate a,c-diamide synthase -
  FOC72_RS07950 (FOC72_07950) rcrQ 1654089..1655846 (-) 1758 WP_002896472.1 ABC transporter ATP-binding protein Regulator
  FOC72_RS07955 (FOC72_07955) rcrP 1655836..1657602 (-) 1767 WP_032914258.1 ABC transporter ATP-binding protein Regulator
  FOC72_RS07960 (FOC72_07960) - 1657595..1658053 (-) 459 WP_002896474.1 MarR family winged helix-turn-helix transcriptional regulator -
  FOC72_RS07965 (FOC72_07965) - 1658207..1658617 (-) 411 WP_002896475.1 peptide deformylase -
  FOC72_RS07970 (FOC72_07970) scrK 1658664..1659563 (-) 900 WP_002896476.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64427.44 Da        Isoelectric Point: 5.0990

>NTDB_id=453510 FOC72_RS07950 WP_002896472.1 1654089..1655846(-) (rcrQ) [Streptococcus sanguinis strain FDAARGOS_770]
MENKKPSLFSQIRPYLKGFQLPLALAFVGAVLSNIITVYGPNKLKEITNLISDGLATSIDLKAVSQIALLLTVLYAIGAL
LNYGQSFIISTVIQYFSKRLRTAIAEKINKLPLGYFDGHSQGDTLSRVTNDVDTVGQSLNQSLGNVISASLLLVAVVLTM
FFMNWILALVTILATILGFVFVGLIMGKSQGYFTAQQNDLAAVNGYVEEMYSGHNVVTSYNAIEQSKERFAVLNHNLYNS
IWKSQFISGMMMPLMFFTGNFAYVLVILVGAALAINGSISIGIIVAFMVYVRTFSQPLSQIAQGIAVLQQAGAALVRVLE
FLAEPEMEDDQHKEQQLAAVKGDVAFEDVFFGYKPDQTIIHDFSARAKAGQKIAIVGPTGAGKTTIVNLLMKFYEINKGR
ISIDGIDIKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQEHVTDEAVVAAAKAVGVHHFIMTLPQGYDTVLDDTVNL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDELMEQNGFYADLYNSQFVEEDAG

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=453510 FOC72_RS07950 WP_002896472.1 1654089..1655846(-) (rcrQ) [Streptococcus sanguinis strain FDAARGOS_770]
ATGGAAAATAAGAAGCCTTCATTATTTAGCCAGATACGGCCTTATCTCAAAGGCTTCCAGCTTCCTCTTGCTTTGGCATT
TGTGGGAGCTGTCTTGTCAAACATTATCACGGTCTATGGGCCAAATAAATTAAAAGAAATTACCAACCTCATCTCTGATG
GTCTGGCTACCAGTATTGATTTGAAAGCTGTGTCTCAGATTGCCCTTCTGCTGACCGTGCTCTATGCAATCGGAGCCTTG
CTCAACTACGGCCAGTCCTTTATCATCAGTACGGTTATCCAGTATTTCTCCAAGCGGCTGCGGACAGCCATTGCAGAGAA
GATAAACAAGCTGCCGTTGGGCTATTTCGATGGTCATTCTCAGGGGGATACTCTGTCGCGCGTGACCAATGACGTGGATA
CAGTCGGCCAATCCCTCAACCAGAGTTTGGGTAATGTTATCTCTGCCAGCCTGCTCTTGGTGGCTGTGGTTTTGACCATG
TTCTTTATGAACTGGATCTTGGCCTTGGTAACCATCTTGGCTACTATACTCGGCTTTGTCTTTGTCGGCCTCATCATGGG
CAAGTCCCAGGGCTATTTCACCGCCCAGCAAAACGATCTGGCTGCTGTCAACGGTTATGTGGAGGAGATGTACTCCGGCC
ATAATGTCGTTACCAGCTATAATGCTATTGAGCAGTCTAAGGAGCGCTTTGCAGTTCTTAATCACAATCTCTATAACAGT
ATTTGGAAGTCTCAATTTATCTCTGGCATGATGATGCCGCTCATGTTCTTTACGGGGAATTTTGCCTATGTGCTGGTTAT
TTTGGTCGGTGCTGCTCTGGCGATTAATGGCTCTATTAGTATCGGAATTATTGTCGCCTTTATGGTTTATGTGCGGACCT
TCTCTCAGCCGTTGTCACAGATTGCCCAAGGTATCGCTGTCTTGCAGCAGGCTGGTGCAGCACTGGTTCGTGTCCTTGAA
TTTCTGGCTGAGCCTGAGATGGAAGACGACCAGCATAAAGAGCAGCAGCTTGCTGCTGTCAAGGGAGATGTTGCCTTTGA
AGATGTCTTCTTCGGTTACAAGCCAGACCAGACGATTATTCATGATTTCTCAGCTCGGGCCAAAGCCGGACAGAAGATTG
CCATTGTCGGCCCGACGGGTGCTGGTAAGACGACCATCGTTAATCTGCTCATGAAGTTCTATGAAATTAATAAAGGGCGT
ATCAGCATTGATGGTATAGATATTAAGGATATGAAACGCTCCGAGGTTCACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAGGGGACGATTCGGGAGAACTTAATTTACAATCAGGAGCATGTGACAGATGAAGCAGTTGTTGCCGCAG
CGAAGGCGGTCGGTGTTCATCACTTTATTATGACTCTGCCGCAGGGCTATGATACAGTGCTGGATGACACGGTCAACTTA
TCGGTTGGTCAGAAGCAGCTGCTGACCATCGCTCGTGCTCTGCTGAAAGATGCACCGCTCTTGATCTTGGATGAGGCAAC
TTCGTCAGTCGATACGCGGACGGAGGAGCTCATTCAAAAGGCTATGGACAAACTCATGGAGGGCCGGACTTCCTTTGTCA
TTGCTCACCGCCTGTCCACTATCCGTAATGCAGATCTTATCTTGGTCATGCGCGATGGGAATATCATCGAGCAGGGCAAC
CACGATGAACTCATGGAGCAGAATGGCTTCTATGCGGACCTCTATAATAGTCAGTTTGTAGAGGAAGATGCAGGTTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859EP38

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.521

99.829

0.694