Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   FOC72_RS07060 Genome accession   NZ_CP054570
Coordinates   1483883..1484545 (+) Length   220 a.a.
NCBI ID   WP_002896192.1    Uniprot ID   A0A859ENP7
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1478883..1489545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS07025 (FOC72_07025) - 1479101..1479370 (-) 270 WP_002898040.1 DUF3165 family protein -
  FOC72_RS07030 (FOC72_07030) typA 1479394..1481241 (-) 1848 WP_002932699.1 translational GTPase TypA -
  FOC72_RS07035 (FOC72_07035) - 1481422..1482147 (+) 726 WP_002896180.1 pseudouridine synthase -
  FOC72_RS07040 (FOC72_07040) - 1482181..1482420 (-) 240 WP_002896181.1 DUF4190 domain-containing protein -
  FOC72_RS07045 (FOC72_07045) - 1482510..1482890 (-) 381 WP_002896183.1 rhodanese-like domain-containing protein -
  FOC72_RS07050 (FOC72_07050) - 1482892..1483110 (-) 219 WP_002896185.1 YqgQ family protein -
  FOC72_RS07055 (FOC72_07055) - 1483201..1483716 (-) 516 WP_002896187.1 DNA starvation/stationary phase protection protein -
  FOC72_RS07060 (FOC72_07060) cclA/cilC 1483883..1484545 (+) 663 WP_002896192.1 A24 family peptidase Machinery gene
  FOC72_RS07065 (FOC72_07065) - 1484539..1485039 (-) 501 WP_002896195.1 effector binding domain-containing protein -
  FOC72_RS07070 (FOC72_07070) - 1485067..1485966 (+) 900 WP_002896196.1 YafY family protein -
  FOC72_RS11565 - 1486048..1486203 (+) 156 Protein_1396 prepilin peptidase -
  FOC72_RS07075 (FOC72_07075) trpA 1486172..1486951 (-) 780 WP_002896199.1 tryptophan synthase subunit alpha -
  FOC72_RS07080 (FOC72_07080) trpB 1486944..1488167 (-) 1224 WP_002896202.1 tryptophan synthase subunit beta -
  FOC72_RS07085 (FOC72_07085) - 1488157..1488744 (-) 588 WP_002896203.1 phosphoribosylanthranilate isomerase -
  FOC72_RS07090 (FOC72_07090) trpC 1488731..1489498 (-) 768 WP_002896205.1 indole-3-glycerol phosphate synthase TrpC -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 24805.12 Da        Isoelectric Point: 8.5733

>NTDB_id=453507 FOC72_RS07060 WP_002896192.1 1483883..1484545(+) (cclA/cilC) [Streptococcus sanguinis strain FDAARGOS_770]
MIHLYFFIVGTVFASFLGLVIDRFPEWSIITPASHCNACGKRLAPRDLIPIFSQILNLLRCRFCGDKIPLRYLFFESILG
SLFLATSLGILSISQLLVVTMGLTLAIYDQREQQYPLMVWLIFQLLLMVTTGVNFLMLFFLALGLLAFFCNLRIGAGDFL
FLASCSAIFSLTEILILIQIASFAGLACFCFKKKKDRLAFVPCLLFGVVVIISYKSLLFY

Nucleotide


Download         Length: 663 bp        

>NTDB_id=453507 FOC72_RS07060 WP_002896192.1 1483883..1484545(+) (cclA/cilC) [Streptococcus sanguinis strain FDAARGOS_770]
ATGATTCACCTATACTTTTTTATCGTTGGTACTGTCTTTGCCTCATTCCTAGGCTTGGTCATCGACCGCTTCCCAGAGTG
GTCTATCATCACTCCCGCTAGCCATTGCAATGCCTGCGGGAAAAGATTGGCACCGCGTGATTTGATCCCTATTTTTTCCC
AAATTTTAAATCTTCTTCGTTGCCGCTTCTGTGGAGACAAGATTCCCTTACGCTATTTATTTTTTGAATCTATCTTGGGC
AGTCTTTTTCTGGCAACCTCCCTGGGCATTCTTTCCATTAGTCAATTATTGGTAGTCACCATGGGCTTAACCTTAGCTAT
CTACGATCAAAGAGAGCAGCAATATCCCCTGATGGTATGGCTGATTTTTCAGCTCTTGCTAATGGTGACAACAGGCGTCA
ACTTTCTCATGCTCTTCTTTTTAGCCCTAGGACTTCTAGCCTTCTTTTGTAATCTTCGTATTGGAGCTGGTGACTTTCTC
TTTCTGGCGTCCTGCTCAGCCATTTTCAGTCTGACGGAAATTCTCATTCTTATCCAAATCGCTAGCTTCGCTGGTCTCGC
CTGTTTTTGCTTTAAAAAGAAAAAAGACAGGCTGGCATTTGTACCCTGTCTTTTGTTTGGTGTGGTGGTGATTATTTCTT
ATAAATCCCTACTCTTTTACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A859ENP7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

59.633

99.091

0.591

  cclA/cilC Streptococcus mitis SK321

59.174

99.091

0.586

  cclA/cilC Streptococcus pneumoniae Rx1

57.339

99.091

0.568

  cclA/cilC Streptococcus pneumoniae D39

57.339

99.091

0.568

  cclA/cilC Streptococcus pneumoniae R6

57.339

99.091

0.568

  cclA/cilC Streptococcus pneumoniae TIGR4

56.881

99.091

0.564