Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   FOC72_RS06625 Genome accession   NZ_CP054570
Coordinates   1393379..1394329 (-) Length   316 a.a.
NCBI ID   WP_002896060.1    Uniprot ID   A0A859EQ12
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1388379..1399329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS06590 (FOC72_06590) - 1388435..1388809 (-) 375 WP_002896050.1 hypothetical protein -
  FOC72_RS06595 (FOC72_06595) - 1388806..1390395 (-) 1590 WP_002896052.1 hypothetical protein -
  FOC72_RS06600 (FOC72_06600) - 1390397..1390783 (-) 387 WP_032914211.1 DUF1310 family protein -
  FOC72_RS06605 (FOC72_06605) - 1390951..1391337 (-) 387 WP_002896055.1 DUF1310 family protein -
  FOC72_RS06610 (FOC72_06610) - 1391664..1392051 (-) 388 Protein_1302 DUF1310 family protein -
  FOC72_RS06615 (FOC72_06615) - 1392204..1392611 (-) 408 WP_002896057.1 DUF1310 family protein -
  FOC72_RS06620 (FOC72_06620) - 1392822..1393208 (-) 387 WP_002902666.1 DUF1310 family protein -
  FOC72_RS06625 (FOC72_06625) coiA 1393379..1394329 (-) 951 WP_002896060.1 competence protein CoiA Machinery gene
  FOC72_RS06630 (FOC72_06630) - 1394445..1395614 (-) 1170 WP_002896061.1 MFS transporter -
  FOC72_RS06635 (FOC72_06635) - 1395709..1397064 (-) 1356 WP_080555505.1 DUF1958 domain-containing protein -
  FOC72_RS06640 (FOC72_06640) nagB 1397215..1397922 (-) 708 WP_002896064.1 glucosamine-6-phosphate deaminase -
  FOC72_RS06645 (FOC72_06645) - 1398057..1398236 (+) 180 WP_002896065.1 hypothetical protein -
  FOC72_RS06650 (FOC72_06650) queA 1398246..1399274 (+) 1029 WP_002896066.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 37546.18 Da        Isoelectric Point: 8.5357

>NTDB_id=453502 FOC72_RS06625 WP_002896060.1 1393379..1394329(-) (coiA) [Streptococcus sanguinis strain FDAARGOS_770]
MFVARNHKGLLCNALEEKIEKGADFVCPACSGAVRFKKGKVMQPHFAHVSLEQCHFYKENESAEHLNLKAELFRWAVQTE
EVEVEAFLPALQQIADLLVDKKLALEVQCSPLSIERLQERTISYRQHGYQVLWLLGRKLWLKDSLTRLQKDFLYFSKNMG
FHLWELDQEKQVLRLKYLIHEDLHGKVQHKTKNFPFGHGRFLDILRLPFQKQEINSFLAQQDPHICNYIRRQLYYQQPRW
MRLQAQLYQNGDNLLTKTAEDFYPQVRPIQATSFSQITTDLTGYYQQFENYYANLQQKNLQIVYSPAFYEMIREKC

Nucleotide


Download         Length: 951 bp        

>NTDB_id=453502 FOC72_RS06625 WP_002896060.1 1393379..1394329(-) (coiA) [Streptococcus sanguinis strain FDAARGOS_770]
ATGTTTGTGGCGAGAAATCATAAGGGGCTTTTGTGTAATGCTCTGGAGGAGAAGATTGAGAAGGGGGCTGATTTCGTCTG
CCCGGCTTGTTCAGGGGCAGTCCGTTTTAAAAAAGGGAAGGTTATGCAGCCGCATTTTGCGCATGTTTCGTTAGAGCAGT
GCCACTTTTACAAGGAAAATGAGAGCGCTGAGCACCTGAACCTTAAGGCGGAGCTTTTTCGCTGGGCAGTCCAGACAGAA
GAAGTTGAGGTGGAGGCTTTTTTGCCTGCTCTGCAGCAGATTGCTGATTTGCTGGTTGATAAAAAACTGGCTCTTGAAGT
CCAGTGCAGTCCCCTAAGTATAGAACGGCTGCAGGAACGGACGATTTCTTACCGCCAGCATGGTTATCAGGTTCTCTGGC
TTTTGGGGCGAAAACTTTGGCTCAAGGATTCCCTAACTCGCCTGCAGAAGGATTTTCTCTATTTTAGTAAAAATATGGGC
TTTCATCTTTGGGAGCTGGATCAAGAAAAGCAAGTTCTGCGTCTCAAATACCTGATTCACGAAGATCTGCATGGAAAAGT
CCAGCACAAGACCAAGAACTTTCCCTTTGGTCACGGCCGGTTTTTGGATATTTTGCGTTTGCCCTTTCAAAAGCAGGAGA
TAAACAGCTTTCTGGCCCAGCAAGATCCGCACATCTGCAATTATATCCGTCGTCAGCTTTATTACCAGCAGCCTAGATGG
ATGAGGCTGCAGGCCCAGCTCTACCAGAATGGCGATAATCTATTGACTAAGACTGCAGAGGATTTTTATCCGCAGGTTCG
GCCAATACAAGCTACCTCCTTCAGTCAGATAACTACTGACCTGACTGGCTATTACCAGCAGTTTGAGAACTATTATGCCA
ATCTCCAGCAAAAAAATCTGCAAATTGTTTATTCACCGGCTTTTTATGAGATGATAAGAGAAAAATGCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859EQ12

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

55.484

98.101

0.544
  coiA Streptococcus pneumoniae TIGR4

54.194

98.101

0.532
  coiA Streptococcus pneumoniae Rx1

54.194

98.101

0.532
  coiA Streptococcus pneumoniae D39

54.194

98.101

0.532
  coiA Streptococcus pneumoniae R6

54.194

98.101

0.532
  coiA Lactococcus lactis subsp. cremoris KW2

42.462

100

0.437