Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   FOC72_RS00035 Genome accession   NZ_CP054570
Coordinates   6799..8772 (-) Length   657 a.a.
NCBI ID   WP_002893950.1    Uniprot ID   A0A8B6N1E2
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1799..13772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS00020 (FOC72_00020) - 2057..3067 (-) 1011 Protein_3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FOC72_RS00025 (FOC72_00025) - 3254..4916 (+) 1663 Protein_4 ABC transporter ATP-binding protein -
  FOC72_RS00030 (FOC72_00030) - 4932..6683 (+) 1752 Protein_5 ABC transporter ATP-binding protein -
  FOC72_RS00035 (FOC72_00035) amiA 6799..8772 (-) 1974 WP_002893950.1 peptide ABC transporter substrate-binding protein Regulator
  FOC72_RS00040 (FOC72_00040) - 9000..9689 (+) 690 WP_002893948.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
  FOC72_RS00045 (FOC72_00045) - 9906..10349 (+) 444 WP_002893947.1 dUTP diphosphatase -
  FOC72_RS00050 (FOC72_00050) - 10351..10866 (+) 516 WP_002893946.1 histidine phosphatase family protein -
  FOC72_RS00055 (FOC72_00055) - 10919..11551 (+) 633 WP_002893945.1 methyltransferase domain-containing protein -
  FOC72_RS00060 (FOC72_00060) radA 11557..12924 (+) 1368 WP_080557372.1 DNA repair protein RadA Machinery gene
  FOC72_RS00065 (FOC72_00065) - 13041..13757 (+) 717 WP_002893943.1 TIGR00266 family protein -

Sequence

Protein


Download         Length: 657 a.a.        Molecular weight: 72390.35 Da        Isoelectric Point: 4.6440

>NTDB_id=453470 FOC72_RS00035 WP_002893950.1 6799..8772(-) (amiA) [Streptococcus sanguinis strain FDAARGOS_770]
MRKSNILLAAGLTLLSVGLLTACSGGGSSQSSKKIYSYVFTSDPTTLDYIQSAKVSTHELTTNGVDGLLENDKYGNLAPS
IAEDWTVSPDGLVYTYKLRKDAKWYTADGEEYADVTAQDFVTGIKHAADIKSDALPLIQDSIKGLSEYAAGTNKDFSAVG
VKALDDHTVQYTLNKPETYWNSKTTSGVMMPVNEAFLEKQGKEFGQATKADSILYNGPFIMKSITSKSSVEFEKNPNYWD
KDKVKIDGVKLSYYDGSDQDSLARTFGDGGYSLARLYPATSSYSSIAEKYKDNIFMTEAGAGVGLISFNIDRQSYNHTSK
TSDEQKEATKKALLNKDFRQALAFALNRESYSAQVNGEDAAKPAVRNLFVPPTFVQANGKEFGTLVEESLASYGDEWKGI
KLDDGQDGLHNTDKAKAEFAKAKQALADEGVQFPIHLDVPVAQNSTNFVNRMQSLKQSLEEALGKDNVSVDLQMLAEDEA
LNITFNAEAASQEDWDINGLVGWEPDYQDPSTYLDILVPGNSTQTRTYLGFEDKDNAAAKAVGLDEYSKLIEEAGNETQD
VDKRYEKYAAAQAWLTDSALVVPTMSSRGAAPFISRIVPFTNSYAQTGTKDANYHKYVEISDEIVTTKDYQKVQEKWKKE
KEESNKKAQEDLAKHVK

Nucleotide


Download         Length: 1974 bp        

>NTDB_id=453470 FOC72_RS00035 WP_002893950.1 6799..8772(-) (amiA) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAGAAAATCAAATATTCTTCTTGCCGCAGGGCTCACTCTGCTCTCTGTCGGCTTACTTACAGCTTGCTCTGGAGGCGG
AAGTTCCCAATCCAGCAAAAAAATCTACAGCTATGTCTTTACGTCTGATCCAACGACTTTGGACTACATCCAGTCAGCAA
AGGTGTCTACCCACGAGCTGACTACAAATGGTGTAGACGGCTTGCTGGAAAATGATAAATATGGAAACTTAGCTCCGTCT
ATCGCAGAAGATTGGACAGTCTCTCCAGATGGTCTCGTCTATACCTATAAGCTGCGCAAAGATGCCAAGTGGTATACCGC
TGATGGCGAAGAATACGCAGATGTCACGGCTCAGGACTTTGTAACAGGTATCAAACATGCTGCTGATATCAAATCAGACG
CCCTCCCTCTTATCCAAGATTCCATCAAGGGACTGAGTGAATATGCAGCTGGTACCAACAAGGACTTTTCAGCTGTTGGA
GTTAAGGCACTGGACGATCATACGGTTCAATATACACTCAACAAGCCTGAAACCTACTGGAACTCTAAAACAACATCAGG
TGTTATGATGCCGGTCAACGAGGCCTTCCTAGAAAAGCAAGGCAAGGAATTCGGTCAGGCAACCAAAGCCGACTCCATTC
TGTATAACGGTCCATTTATCATGAAATCCATTACTTCTAAATCCTCTGTCGAATTTGAGAAGAACCCTAACTACTGGGAT
AAGGACAAGGTTAAGATTGATGGCGTCAAACTATCTTACTACGATGGTTCTGACCAAGATTCATTAGCGCGGACCTTCGG
AGATGGCGGCTACAGTTTGGCAAGACTCTACCCAGCCACTTCCAGTTATTCCTCAATCGCTGAGAAATACAAAGATAATA
TCTTCATGACAGAAGCAGGAGCGGGTGTCGGTCTAATCAGCTTTAACATTGACCGTCAAAGTTATAACCATACTTCTAAA
ACCAGCGATGAACAAAAAGAAGCTACCAAAAAAGCTCTGCTGAACAAAGACTTCCGCCAAGCTCTAGCCTTTGCCCTTAA
CCGCGAAAGCTATTCAGCTCAGGTCAACGGAGAAGATGCAGCCAAGCCAGCTGTCCGTAATCTCTTTGTTCCGCCAACCT
TCGTACAAGCCAATGGCAAGGAATTTGGCACTCTGGTCGAAGAATCACTAGCTTCCTATGGTGACGAGTGGAAAGGTATC
AAGCTGGATGACGGCCAAGACGGTCTCCACAATACTGACAAAGCCAAAGCGGAATTTGCCAAAGCCAAGCAGGCTCTTGC
AGATGAAGGCGTACAATTCCCAATCCATCTAGACGTTCCTGTCGCTCAGAATTCTACTAACTTCGTCAACCGCATGCAAT
CTCTGAAACAGTCACTAGAAGAGGCTTTAGGAAAGGACAATGTCTCTGTAGACCTACAGATGCTGGCTGAGGACGAAGCA
CTAAACATCACCTTCAATGCTGAAGCTGCTAGCCAGGAAGACTGGGATATCAACGGTCTCGTTGGCTGGGAGCCAGACTA
CCAAGATCCATCTACTTACCTGGACATTTTAGTGCCAGGTAACAGCACTCAGACCAGAACCTACCTTGGATTTGAAGACA
AAGACAATGCTGCTGCTAAAGCTGTAGGACTGGATGAGTACAGCAAGCTGATCGAAGAGGCCGGAAACGAAACACAAGAT
GTTGACAAGCGTTATGAAAAATATGCTGCAGCTCAAGCATGGCTGACAGATAGTGCCCTCGTTGTGCCAACTATGAGCAG
CAGAGGAGCAGCACCGTTCATTTCTCGGATTGTGCCATTTACCAACTCTTATGCTCAGACAGGTACAAAAGATGCCAACT
ACCATAAATACGTGGAAATCAGTGATGAGATTGTCACGACTAAAGACTATCAAAAGGTCCAAGAAAAGTGGAAAAAAGAA
AAAGAGGAATCCAATAAAAAGGCCCAAGAAGATCTGGCTAAACATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A8B6N1E2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

59.119

100

0.592
  amiA3 Streptococcus thermophilus LMD-9

58.118

100

0.583
  amiA3 Streptococcus thermophilus LMG 18311

57.511

100

0.577