Detailed information NTG0453471

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: FOC72_RS00060
• Genome accession: NZ_CP054570
• Coordinates: 11557..12924 (+)
• Length: 455 a.a.
• NCBI ID: WP_080557372.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain FDAARGOS_770
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6557..17924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC72_RS00035 (FOC72_00035)	amiA	6799..8772 (-)	1974	WP_002893950.1	peptide ABC transporter substrate-binding protein	Regulator
FOC72_RS00040 (FOC72_00040)	-	9000..9689 (+)	690	WP_002893948.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-
FOC72_RS00045 (FOC72_00045)	-	9906..10349 (+)	444	WP_002893947.1	dUTP diphosphatase	-
FOC72_RS00050 (FOC72_00050)	-	10351..10866 (+)	516	WP_002893946.1	histidine phosphatase family protein	-
FOC72_RS00055 (FOC72_00055)	-	10919..11551 (+)	633	WP_002893945.1	methyltransferase domain-containing protein	-
FOC72_RS00060 (FOC72_00060)	radA	11557..12924 (+)	1368	WP_080557372.1	DNA repair protein RadA	Machinery gene
FOC72_RS00065 (FOC72_00065)	-	13041..13757 (+)	717	WP_002893943.1	TIGR00266 family protein	-
FOC72_RS00070 (FOC72_00070)	-	13871..14566 (+)	696	WP_002893942.1	TIGR00266 family protein	-
FOC72_RS00075 (FOC72_00075)	-	14856..15341 (+)	486	WP_002893940.1	GNAT family N-acetyltransferase	-
FOC72_RS00080 (FOC72_00080)	-	15505..16002 (+)	498	WP_002893938.1	carbonic anhydrase	-
FOC72_RS00085 (FOC72_00085)	-	16100..16966 (+)	867	WP_002893936.1	ABC transporter permease	-
FOC72_RS00090 (FOC72_00090)	-	16963..17721 (+)	759	WP_002893934.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 49770.13 Da
• Isoelectric Point: 5.7873

>NTDB_id=453471 FOC72_RS00060 WP_080557372.1 11557..12924(+) (radA) [Streptococcus sanguinis strain FDAARGOS_770]
MTIVKKKTTFVCQNCEYHSPKYLGRCPNCGSWSSFVEEVEAAEVKHARVSLTGEKTRPMKLAEVTSIDVNRTKTEMDEFN
RVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSHQGIVLYVSGEESAEQIKLRAERLGDIDSEFYLYAETNMQNIRTE
IEKIKPDFLIIDSIQTVVSPEISSVQGSVSQVREVTAELMQLAKTNNIATFIVGHMTKEGTLAGPRTLEHMVDTVLYFEG
ERQHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVVNPSEVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGN
AKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDLPTNPQECFIGEIGLTGE
IRRVNRIEQRINEAAKLGFTKVYAPKNSLNGLKVPDNIQVIGVTTIGEVLKKVFS

Nucleotide

• Length: 1368 bp

>NTDB_id=453471 FOC72_RS00060 WP_080557372.1 11557..12924(+) (radA) [Streptococcus sanguinis strain FDAARGOS_770]
ATCACCATCGTTAAGAAAAAAACGACCTTTGTCTGTCAAAATTGTGAATATCATTCGCCCAAGTACCTAGGCCGCTGTCC
TAACTGTGGCTCTTGGTCTTCTTTCGTTGAGGAAGTAGAGGCTGCAGAGGTCAAGCATGCCCGTGTTTCCTTGACAGGCG
AAAAGACCCGGCCCATGAAGCTGGCTGAGGTCACTTCGATTGATGTCAATCGGACCAAGACGGAAATGGACGAGTTCAAC
CGTGTGCTGGGTGGTGGCGTAGTGCCTGGTAGTCTGGTTCTGATTGGCGGGGATCCCGGTATCGGGAAATCCACCCTGCT
TCTGCAAGTATCCACCCAGCTTTCCCACCAGGGCATCGTCCTATATGTCAGTGGGGAGGAATCAGCTGAGCAGATTAAGT
TGCGGGCGGAGCGTCTCGGTGATATTGACAGTGAATTTTATCTTTACGCCGAGACCAATATGCAAAATATCCGCACAGAG
ATTGAGAAAATCAAGCCAGATTTTCTGATTATTGACTCTATACAGACGGTGGTGTCACCGGAAATTTCCAGTGTTCAAGG
TTCTGTTTCTCAGGTTCGAGAGGTAACGGCTGAGCTCATGCAGCTGGCCAAGACCAATAATATCGCAACCTTTATCGTTG
GTCACATGACCAAGGAAGGAACCTTAGCTGGTCCCCGAACACTAGAGCACATGGTGGACACCGTGCTTTATTTTGAGGGT
GAACGTCAGCATACTTTCCGTATCTTGAGAGCCGTCAAGAACCGCTTTGGCTCAACCAATGAGATTGGCATTTTTGAAAT
GCAGTCTGGTGGGCTAGTTGAGGTTGTCAATCCAAGTGAAGTCTTTCTAGAAGAGCGTCTGGATGGCGCGACAGGTTCGT
CTATTGTCGTGACCATGGAAGGGACGCGGCCGATTTTGGCAGAGGTGCAGGCTTTGGTGACACCAACCATGTTCGGCAAT
GCTAAGCGGACCACAACTGGACTGGACTTTAACCGAGCCAGCCTCATCATGGCGGTTCTGGAAAAACGGGCAGGGCTCCT
CCTGCAAAATCAAGACGCCTACCTCAAATCAGCCGGCGGCGTCAAGCTAGATGAGCCAGCCATTGATTTGGCGGTGGCGG
TAGCCATTGCTTCCAGCTACAAGGATTTACCTACCAATCCCCAAGAGTGCTTTATCGGTGAAATTGGCCTGACTGGCGAA
ATCCGACGGGTCAACCGCATCGAGCAGCGCATCAACGAAGCAGCAAAGCTGGGCTTCACCAAAGTCTACGCTCCTAAAAA
CTCTCTGAACGGCCTCAAAGTTCCAGACAATATCCAAGTCATCGGTGTGACGACGATTGGGGAAGTCTTAAAGAAAGTAT
TTTCTTGA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-37)

• AAA domain (AAA_25) (63-220)

• Subunit ChlI of Mg-chelatase (ChlI) (362-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis NCTC 12261	90.949	99.56	0.905
radA	Streptococcus pneumoniae Rx1	90.728	99.56	0.903
radA	Streptococcus pneumoniae D39	90.728	99.56	0.903
radA	Streptococcus pneumoniae R6	90.728	99.56	0.903
radA	Streptococcus pneumoniae TIGR4	90.728	99.56	0.903
radA	Streptococcus mitis SK321	90.728	99.56	0.903
radA	Bacillus subtilis subsp. subtilis str. 168	62.252	99.56	0.62