Detailed information NTG0045298

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BAXH7_RS01830
• Genome accession: NC_017191
• Coordinates: 370869..372017 (+)
• Length: 382 a.a.
• NCBI ID: WP_013351004.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens XH7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 365869..377017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAXH7_RS01810 (BAXH7_00354)	-	366266..366949 (-)	684	WP_014469746.1	ABC transporter ATP-binding protein	-
BAXH7_RS01815 (BAXH7_00355)	-	366964..368400 (-)	1437	WP_013351001.1	ABC transporter permease	-
BAXH7_RS01820 (BAXH7_00357)	-	368613..369296 (+)	684	WP_013351002.1	response regulator transcription factor	-
BAXH7_RS01825 (BAXH7_00358)	-	369283..370710 (+)	1428	WP_161988189.1	HAMP domain-containing sensor histidine kinase	-
BAXH7_RS01830 (BAXH7_00360)	rapC	370869..372017 (+)	1149	WP_013351004.1	tetratricopeptide repeat protein	Regulator
BAXH7_RS01835 (BAXH7_00361)	phrC	372001..372120 (+)	120	WP_013351005.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BAXH7_RS20035 (BAXH7_00363)	-	372268..372369 (-)	102	WP_013351006.1	YjcZ family sporulation protein	-
BAXH7_RS01845 (BAXH7_00364)	-	372464..373828 (-)	1365	WP_014469748.1	aspartate kinase	-
BAXH7_RS01850 (BAXH7_00366)	ceuB	374242..375195 (+)	954	WP_013351008.1	ABC transporter permease	Machinery gene
BAXH7_RS01855 (BAXH7_00367)	-	375185..376132 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
BAXH7_RS01860 (BAXH7_00368)	-	376126..376884 (+)	759	WP_013351009.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45545.80 Da
• Isoelectric Point: 5.0674

>NTDB_id=45298 BAXH7_RS01830 WP_013351004.1 370869..372017(+) (rapC) [Bacillus amyloliquefaciens XH7]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQNRID
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=45298 BAXH7_RS01830 WP_013351004.1 370869..372017(+) (rapC) [Bacillus amyloliquefaciens XH7]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTACCGATACATAAGAACATTCAGCGT
GCCGGATGCAGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTACTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTATTTGGAGCCGCTGGAGAAATTGAAAATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTCGATAACATAGATAACAGCCAGGCCGGGCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATCACGTATTATAAACAGGCTGAGAAAAAATTGGCCT
TCGTATCGGACCACGTGGAGCGCGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAATGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTGTTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGAACCGCATCGAT
GAAGCCATACCGTACTTTGAACGGGCAGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTCCCTCAGGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCATCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTCGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.723	100	0.827
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571