Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   I6H76_RS03145 Genome accession   NZ_CP065994
Coordinates   630733..631377 (+) Length   214 a.a.
NCBI ID   WP_006531570.1    Uniprot ID   A0ABM9XFQ1
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 625733..636377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS03120 (I6H76_03120) - 627320..628267 (-) 948 WP_006531565.1 hypothetical protein -
  I6H76_RS03125 (I6H76_03125) - 628372..628752 (-) 381 WP_006531566.1 rhodanese-like domain-containing protein -
  I6H76_RS03130 (I6H76_03130) - 628766..629734 (-) 969 WP_006531567.1 ROK family glucokinase -
  I6H76_RS03135 (I6H76_03135) - 629727..629936 (-) 210 WP_006531568.1 YqgQ family protein -
  I6H76_RS03140 (I6H76_03140) - 630070..630594 (-) 525 WP_006531569.1 DNA starvation/stationary phase protection protein -
  I6H76_RS03145 (I6H76_03145) cclA/cilC 630733..631377 (+) 645 WP_006531570.1 A24 family peptidase Machinery gene
  I6H76_RS03150 (I6H76_03150) - 631471..632817 (+) 1347 WP_006531571.1 Nramp family divalent metal transporter -
  I6H76_RS03155 (I6H76_03155) trpA 632853..633635 (-) 783 WP_006531572.1 tryptophan synthase subunit alpha -
  I6H76_RS03160 (I6H76_03160) trpB 633639..634841 (-) 1203 WP_006531573.1 tryptophan synthase subunit beta -
  I6H76_RS03165 (I6H76_03165) - 634838..635419 (-) 582 WP_006531574.1 phosphoribosylanthranilate isomerase -
  I6H76_RS03170 (I6H76_03170) trpC 635406..636173 (-) 768 WP_006531575.1 indole-3-glycerol phosphate synthase TrpC -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24331.33 Da        Isoelectric Point: 7.2172

>NTDB_id=452785 I6H76_RS03145 WP_006531570.1 630733..631377(+) (cclA/cilC) [Streptococcus infantarius strain FDAARGOS_1019]
MDTLLFFFLGASLASFIGLVVDRFPKESILFPASHCNTCGKQLRPLDMIPVLSQVFNHSRCHFCKSKIPLWYSIFEFVCG
LATALYYHDIIAPSSLFIFFFSMTLSLYDLKKQSFPLLIWLLPSASLLLFLPLNTVSIILLLLGIIAELFDIKIGSGDFF
YLASLSLFLDLESILWIVELGSLVGILYCLFDKNKRIPFVPVLFLGYLLIMIFK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=452785 I6H76_RS03145 WP_006531570.1 630733..631377(+) (cclA/cilC) [Streptococcus infantarius strain FDAARGOS_1019]
ATGGACACTTTGTTATTCTTTTTTCTTGGAGCATCGCTTGCTTCATTTATCGGATTAGTTGTTGATCGTTTTCCGAAGGA
ATCTATTTTATTTCCTGCTAGTCATTGTAATACCTGTGGTAAACAACTGAGACCGCTAGACATGATTCCAGTTCTTTCTC
AGGTTTTTAACCATTCTCGCTGCCATTTTTGCAAAAGTAAAATTCCTTTATGGTATAGCATTTTTGAATTTGTCTGTGGG
CTCGCAACTGCTCTTTATTACCACGATATCATAGCTCCATCTAGTCTCTTTATTTTCTTCTTTAGCATGACACTTAGTTT
ATATGATTTAAAAAAACAGTCCTTTCCTCTATTAATCTGGTTACTACCCAGTGCTTCTTTACTCCTTTTTCTTCCTCTTA
ATACGGTAAGTATTATTCTTCTTTTACTTGGGATCATAGCTGAGCTCTTTGACATAAAAATCGGTAGCGGTGATTTTTTC
TACCTAGCCAGTTTGAGTCTTTTTCTTGATTTGGAGAGCATTTTATGGATTGTTGAACTGGGTTCTTTGGTAGGAATTCT
GTATTGCCTTTTTGATAAAAACAAACGCATTCCCTTTGTTCCTGTTCTATTTTTAGGCTATCTTTTAATTATGATTTTTA
AGTGA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus pneumoniae TIGR4

43.81

98.131

0.43
  cclA/cilC Streptococcus mitis SK321

42.791

100

0.43
  cclA/cilC Streptococcus mitis NCTC 12261

42.326

100

0.425
  cclA/cilC Streptococcus pneumoniae Rx1

43.333

98.131

0.425
  cclA/cilC Streptococcus pneumoniae D39

43.333

98.131

0.425
  cclA/cilC Streptococcus pneumoniae R6

43.333

98.131

0.425