Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HUF19_RS01085 Genome accession   NZ_CP054475
Coordinates   233209..233592 (+) Length   127 a.a.
NCBI ID   WP_145466915.1    Uniprot ID   A0A9X2WC63
Organism   Thalassolituus hydrocarboniclasticus strain alknpb1M-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 228209..238592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUF19_RS01055 (HUF19_01055) - 228415..229470 (-) 1056 WP_260998106.1 aspartate carbamoyltransferase catalytic subunit -
  HUF19_RS01060 (HUF19_01060) pyrR 229509..230003 (-) 495 WP_145466925.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HUF19_RS01065 (HUF19_01065) ruvX 230013..230474 (-) 462 WP_145466923.1 Holliday junction resolvase RuvX -
  HUF19_RS01070 (HUF19_01070) - 230474..231031 (-) 558 WP_260998107.1 YqgE/AlgH family protein -
  HUF19_RS01075 (HUF19_01075) - 231031..231906 (-) 876 WP_260998108.1 TonB family protein -
  HUF19_RS01080 (HUF19_01080) gshB 232036..232995 (-) 960 WP_260998109.1 glutathione synthase -
  HUF19_RS01085 (HUF19_01085) pilG 233209..233592 (+) 384 WP_145466915.1 twitching motility response regulator PilG Regulator
  HUF19_RS01090 (HUF19_01090) pilH 233631..233996 (+) 366 WP_260998110.1 twitching motility response regulator PilH -
  HUF19_RS01095 (HUF19_01095) - 233998..234522 (+) 525 WP_260998111.1 chemotaxis protein CheW -
  HUF19_RS01100 (HUF19_01100) - 234619..236673 (+) 2055 WP_260998112.1 methyl-accepting chemotaxis protein -
  HUF19_RS01105 (HUF19_01105) - 236700..237590 (+) 891 WP_260998113.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14209.50 Da        Isoelectric Point: 7.8169

>NTDB_id=452701 HUF19_RS01085 WP_145466915.1 233209..233592(+) (pilG) [Thalassolituus hydrocarboniclasticus strain alknpb1M-1]
MDDNFQNIKVMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADTHPDIIFVDIMMPRLDGYQTCALIKNNSKFK
STPVIMLSSKDGLFDKAKGRIVGSDEYLTKPFSKEELLGSIRQYVKS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=452701 HUF19_RS01085 WP_145466915.1 233209..233592(+) (pilG) [Thalassolituus hydrocarboniclasticus strain alknpb1M-1]
ATGGACGATAACTTTCAGAATATTAAAGTCATGGTCATCGACGACAGTAAAACCATTCGTCGTACGGCTGAGACTTTGCT
TAAAAAGGTCGGCTGCGAAGTCATTACCGCGACAGACGGTTTTGATGCGCTGGCCAAGATTGCCGATACTCACCCGGATA
TCATCTTTGTCGATATCATGATGCCGCGTCTGGATGGTTACCAGACCTGCGCCCTGATCAAAAATAACTCCAAATTCAAA
TCGACTCCGGTAATCATGTTGTCCAGTAAAGACGGTTTGTTCGATAAAGCTAAAGGGCGCATTGTTGGATCTGACGAATA
TTTGACCAAGCCTTTCAGTAAGGAAGAGCTGCTGGGTTCAATCCGTCAGTATGTAAAATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.953

100

0.78
  pilH Synechocystis sp. PCC 6803

41.525

92.913

0.386
  vicR Streptococcus mutans UA159

41.525

92.913

0.386
  micA Streptococcus pneumoniae Cp1015

38.983

92.913

0.362