Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FCG85_RS08025 Genome accession   NZ_CP054410
Coordinates   1655514..1656140 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain KCJ3K13     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1650514..1661140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCG85_RS08005 (FCG85_008010) - 1650913..1652673 (-) 1761 WP_003858160.1 AAA family ATPase -
  FCG85_RS08010 (FCG85_008015) matP 1652860..1653312 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  FCG85_RS08015 (FCG85_008020) ompA 1653378..1654430 (-) 1053 WP_003858156.1 porin OmpA -
  FCG85_RS08020 (FCG85_008025) sulA 1654787..1655296 (-) 510 WP_137041856.1 SOS-induced cell division inhibitor SulA -
  FCG85_RS08025 (FCG85_008030) sxy/tfoX 1655514..1656140 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  FCG85_RS08030 (FCG85_008035) yccS 1656097..1658259 (-) 2163 WP_058658884.1 YccS family putative transporter -
  FCG85_RS08035 (FCG85_008040) - 1658278..1658724 (-) 447 WP_003858149.1 YccF domain-containing protein -
  FCG85_RS08040 (FCG85_008045) helD 1658847..1660889 (+) 2043 WP_137041855.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=452237 FCG85_RS08025 WP_023315767.1 1655514..1656140(+) (sxy/tfoX) [Enterobacter hormaechei strain KCJ3K13]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=452237 FCG85_RS08025 WP_023315767.1 1655514..1656140(+) (sxy/tfoX) [Enterobacter hormaechei strain KCJ3K13]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572