Detailed information NTG0451887

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: I9X29_RS02035
• Genome accession: NZ_CP065867
• Coordinates: 433853..435001 (+)
• Length: 382 a.a.
• NCBI ID: WP_003110016.1
• Uniprot ID: A0A0H2ZL88
• Organism: Pseudomonas aeruginosa strain TJ2014-049
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 428853..440001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I9X29_RS02010 (I9X29_02010)	-	430004..430300 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
I9X29_RS02015 (I9X29_02015)	-	430297..430890 (-)	594	WP_003084544.1	YggT family protein	-
I9X29_RS02020 (I9X29_02020)	proC	430901..431722 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
I9X29_RS02025 (I9X29_02025)	-	431734..432426 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
I9X29_RS02030 (I9X29_02030)	pilT	432641..433675 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
I9X29_RS02035 (I9X29_02035)	pilU	433853..435001 (+)	1149	WP_003110016.1	type IV pilus ATPase PilU	Machinery gene
I9X29_RS02040 (I9X29_02040)	czcD	435009..435908 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
I9X29_RS02045 (I9X29_02045)	-	436062..436466 (+)	405	WP_003084560.1	NINE protein	-
I9X29_RS02050 (I9X29_02050)	-	436709..438082 (+)	1374	WP_057385886.1	pyridoxal-phosphate dependent enzyme	-
I9X29_RS02055 (I9X29_02055)	-	438079..439263 (+)	1185	WP_003110017.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42559.83 Da
• Isoelectric Point: 6.7792

>NTDB_id=451887 I9X29_RS02035 WP_003110016.1 433853..435001(+) (pilU) [Pseudomonas aeruginosa strain TJ2014-049]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSNLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=451887 I9X29_RS02035 WP_003110016.1 433853..435001(+) (pilU) [Pseudomonas aeruginosa strain TJ2014-049]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAACCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: A0A0H2ZL88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.22	100	0.882
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382