Detailed information NTG0451191

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: HRE60_RS08870
• Genome accession: NZ_CP054153
• Coordinates: 1957311..1957703 (-)
• Length: 130 a.a.
• NCBI ID: WP_181670745.1
• Uniprot ID: A0A7L6WMB5
• Organism: Streptococcus salivarius strain DB-B5
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1952311..1962703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRE60_RS08830 (HRE60_08830)	dapD	1952382..1953080 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
HRE60_RS08835 (HRE60_08835)	-	1953166..1953918 (-)	753	WP_181670743.1	HAD family hydrolase	-
HRE60_RS08840 (HRE60_08840)	-	1954032..1954871 (-)	840	WP_181670744.1	methyltransferase domain-containing protein	-
HRE60_RS08850 (HRE60_08850)	-	1955293..1955451 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
HRE60_RS08855 (HRE60_08855)	-	1955471..1955638 (+)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
HRE60_RS08860 (HRE60_08860)	-	1955686..1955937 (+)	252	WP_014635104.1	hypothetical protein	-
HRE60_RS08865 (HRE60_08865)	tadA	1956024..1956542 (-)	519	WP_049553956.1	tRNA adenosine(34) deaminase TadA	-
HRE60_RS08870 (HRE60_08870)	ssbA	1957311..1957703 (-)	393	WP_181670745.1	single-stranded DNA-binding protein	Machinery gene
HRE60_RS08875 (HRE60_08875)	-	1958132..1958809 (-)	678	WP_181670746.1	type II CAAX endopeptidase family protein	-
HRE60_RS08880 (HRE60_08880)	ytpR	1959075..1959698 (-)	624	WP_181670747.1	YtpR family tRNA-binding protein	-
HRE60_RS08885 (HRE60_08885)	-	1959730..1960254 (-)	525	WP_002885713.1	hypothetical protein	-
HRE60_RS08890 (HRE60_08890)	-	1960258..1960572 (-)	315	WP_002887006.1	thioredoxin family protein	-
HRE60_RS08895 (HRE60_08895)	-	1960569..1960853 (-)	285	WP_181670748.1	DUF4651 domain-containing protein	-
HRE60_RS08900 (HRE60_08900)	pepA	1960953..1962020 (+)	1068	WP_181670749.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14787.72 Da
• Isoelectric Point: 5.9275

>NTDB_id=451191 HRE60_RS08870 WP_181670745.1 1957311..1957703(-) (ssbA) [Streptococcus salivarius strain DB-B5]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREVDFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=451191 HRE60_RS08870 WP_181670745.1 1957311..1957703(-) (ssbA) [Streptococcus salivarius strain DB-B5]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGTTGATTTTATTACAGTGGTTGTCT
GGGGGCGCTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATATCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A7L6WMB5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.808
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB	Streptococcus sobrinus strain NIDR 6715-7	75.573	100	0.762
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.738
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	86.154	0.523
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377