Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   I6G27_RS01770 Genome accession   NZ_CP065751
Coordinates   392111..393340 (+) Length   409 a.a.
NCBI ID   WP_062333002.1    Uniprot ID   A0A378Q6J8
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 387111..398340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS01745 (I6G27_01745) - 387518..388006 (+) 489 WP_036591734.1 YajQ family cyclic di-GMP-binding protein -
  I6G27_RS01750 (I6G27_01750) hisB 388100..388702 (-) 603 WP_062333013.1 imidazoleglycerol-phosphate dehydratase HisB -
  I6G27_RS01755 (I6G27_01755) def 388725..389255 (-) 531 WP_062333011.1 peptide deformylase -
  I6G27_RS01760 (I6G27_01760) - 389549..390517 (+) 969 WP_115304568.1 IS4 family transposase -
  I6G27_RS01765 (I6G27_01765) tsaP 390838..391941 (+) 1104 WP_062333005.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6G27_RS01770 (I6G27_01770) dprA 392111..393340 (+) 1230 WP_062333002.1 DNA-processing protein DprA Machinery gene
  I6G27_RS01775 (I6G27_01775) - 393389..393994 (+) 606 WP_062332999.1 L-threonylcarbamoyladenylate synthase -
  I6G27_RS01780 (I6G27_01780) grpE 394207..394806 (+) 600 WP_062332997.1 nucleotide exchange factor GrpE -
  I6G27_RS01785 (I6G27_01785) dnaK 394950..396872 (+) 1923 WP_062332994.1 molecular chaperone DnaK -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 44579.12 Da        Isoelectric Point: 6.6009

>NTDB_id=451076 I6G27_RS01770 WP_062333002.1 392111..393340(+) (dprA) [Moraxella osloensis strain FDAARGOS_870]
MQDYQPNLNPAQQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASRTSQFLHDTL
LELSQGQYGVVFDNDPLYPTQLKNIYDPPPLLFYQGNLSALSQPQLAIVGSRKPSPHAEKIAFDMAQYLAHEGLWVTSGM
AEGIDKQAHLGALSLQMTGTQGGTIAVLGNGIKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLS
LATLVVEAAAKSGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLIDHPSQILEDLSIFKSPLVKATEVETA
PIVVQAVISSPQLPSESASNTQPLQAPLAMDVAPHLQTLLNQLDWVGQDLDSLVDKTGTDIATLMGWLIELELMGLVMQR
GGLYMRCRP

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=451076 I6G27_RS01770 WP_062333002.1 392111..393340(+) (dprA) [Moraxella osloensis strain FDAARGOS_870]
ATGCAGGATTATCAGCCTAACCTAAACCCAGCGCAGCAGGCTGCCTTATTGTTATGGCATTTAGTGAACTTATCGGTGCC
TGTTTATAACAAGCTTGTAGCGCGTTTTGGTAGCGCTGAACAAGCCATTCAAGCTAAGCTAGCAGACTGGCAAGCACTGG
GCTTGCATGATAATCATCACAAACGCTTTGCTGAGTTTATCAGCGCCAGTCGAACCAGCCAATTTTTGCATGATACGCTA
TTAGAGCTATCACAAGGGCAGTATGGGGTTGTGTTTGATAATGACCCTTTATATCCCACGCAGTTAAAAAACATCTATGA
CCCACCGCCTTTGTTATTTTATCAAGGCAATTTATCTGCATTAAGCCAACCACAATTGGCGATTGTTGGTAGCCGCAAAC
CAAGTCCACATGCTGAAAAAATCGCCTTTGATATGGCGCAATATTTGGCGCACGAAGGCTTATGGGTCACCAGTGGCATG
GCAGAAGGCATTGACAAACAAGCGCATTTAGGTGCGTTAAGTCTACAAATGACTGGCACACAAGGTGGTACTATTGCGGT
ACTGGGCAATGGTATTAAACATTGTTACCCAAAAAATCACGCCAGCCTTAAAGCCCATATTATTGCGTCAGGTGGCTGCG
TCATTAGTGAATTATTGCCTGATATGCCGAGCAATCGTTACCATTTTCCAAGGCGCAATCGGCTCGTCGCTGGGCTAAGT
TTGGCAACTTTGGTTGTAGAAGCCGCTGCCAAAAGCGGCTCGCTCATCACTGCCAGAGAAGCCAATGAACAAGGCAAACA
AGTCTTTGCTATTCCTAGTCATATTGATAACCTCAACGCCAAAGGTTGCCACCAATTGATTCGTGAGGGTGCGACCTTGA
TCGATCATCCCTCACAAATTTTGGAAGATTTATCAATTTTTAAATCGCCGCTTGTCAAAGCCACTGAGGTTGAAACAGCG
CCGATAGTTGTACAGGCAGTCATCAGTAGCCCTCAATTACCGTCCGAATCAGCATCAAACACCCAGCCGCTCCAAGCGCC
ATTGGCGATGGATGTGGCGCCACATTTGCAGACACTACTTAATCAACTCGATTGGGTCGGGCAAGATTTAGACAGCTTGG
TCGATAAGACCGGCACGGATATTGCGACACTTATGGGCTGGCTGATTGAGCTTGAACTCATGGGACTGGTGATGCAGCGC
GGTGGTCTATACATGCGCTGCCGCCCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A378Q6J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

44.527

98.289

0.438

  dprA Acinetobacter baumannii D1279779

44.81

96.577

0.433

  dprA Acinetobacter baylyi ADP1

43.878

95.844

0.421