Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   FOC63_RS10010 Genome accession   NZ_CP054015
Coordinates   2001653..2002993 (-) Length   446 a.a.
NCBI ID   WP_009854246.1    Uniprot ID   A0A139QTN8
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1996653..2007993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS09985 (FOC63_09985) - 1997159..1998223 (-) 1065 WP_009854242.1 BMP family lipoprotein -
  FOC63_RS09990 (FOC63_09990) deoC 1998412..1999074 (-) 663 WP_009854243.1 deoxyribose-phosphate aldolase -
  FOC63_RS09995 (FOC63_09995) - 1999564..2000157 (-) 594 WP_009854244.1 class I SAM-dependent methyltransferase -
  FOC63_RS10000 (FOC63_10000) coaA 2000271..2001191 (+) 921 WP_009854245.1 type I pantothenate kinase -
  FOC63_RS10005 (FOC63_10005) rpsT 2001266..2001517 (+) 252 WP_003064878.1 30S ribosomal protein S20 -
  FOC63_RS10010 (FOC63_10010) ciaH 2001653..2002993 (-) 1341 WP_009854246.1 sensor histidine kinase Regulator
  FOC63_RS10015 (FOC63_10015) ciaR 2002983..2003657 (-) 675 WP_009854247.1 response regulator transcription factor Regulator
  FOC63_RS10020 (FOC63_10020) - 2003855..2006398 (-) 2544 WP_009854248.1 M1 family metallopeptidase -
  FOC63_RS10025 (FOC63_10025) phoU 2006621..2007274 (-) 654 WP_009854249.1 phosphate signaling complex protein PhoU -

Sequence

Protein


Download         Length: 446 a.a.        Molecular weight: 50097.86 Da        Isoelectric Point: 5.3673

>NTDB_id=450171 FOC63_RS10010 WP_009854246.1 2001653..2002993(-) (ciaH) [Streptococcus gallolyticus strain FDAARGOS_755]
MLNKLQKKLSSGTFSHFFHFFAVFTGIFVIMTVIILQIMRYGLYSSVDTSLQNAADNANDYVVRTMERSDTLQSDDSSTD
TFSGGTSSSGKAKPSTGGVGLSNVSVLLYDEDGKILNALDAFVQFGTLSTTFDEDSVGEIKEQKITTIFGQTEKYHVLTV
KVSSSEYPSIKYATFLVSVRQLDEASERYVTITITVMVIFWIISVVASVYLANWTRKPIMESYEKQKSFVENASHELRTP
LAVLQNRLESLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEDIQPTTFNEIFENYDMIAEENG
KTFVGHNLAERPIKSDRTLLKQLMTILFDNAIKYTDDDGVIEFTVKTTDKQTILTVADNGPGISDADKVKIFDRFYRVDK
ARTRQKGGFGLGLSLAKQIVDVLKGDIQVKDNQPKGTIFEVRFNRH

Nucleotide


Download         Length: 1341 bp        

>NTDB_id=450171 FOC63_RS10010 WP_009854246.1 2001653..2002993(-) (ciaH) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGCTGAATAAATTACAGAAAAAATTATCGTCAGGGACATTTTCACATTTCTTCCATTTCTTTGCTGTCTTTACGGGAAT
TTTTGTCATCATGACAGTTATCATTTTGCAGATTATGCGCTATGGTCTTTATTCCTCTGTTGATACGAGTTTGCAAAATG
CAGCAGACAATGCCAATGATTATGTCGTGCGAACTATGGAACGTAGCGATACTTTGCAATCGGATGATTCTTCTACGGAC
ACTTTTTCAGGAGGAACAAGTAGTTCTGGGAAAGCGAAACCTAGTACTGGCGGAGTTGGTCTAAGTAACGTTAGCGTTCT
TCTTTATGATGAAGACGGTAAAATCTTAAATGCTTTGGATGCTTTTGTTCAATTTGGAACGTTATCGACAACTTTTGATG
AAGATAGTGTCGGCGAAATCAAAGAACAGAAGATTACGACCATTTTTGGTCAAACCGAGAAATACCATGTGCTGACTGTA
AAAGTGAGTAGTAGCGAGTATCCTAGTATAAAATACGCTACTTTCCTTGTTAGCGTTCGTCAGTTAGATGAAGCTAGCGA
ACGATATGTAACAATTACGATCACTGTTATGGTTATTTTCTGGATTATTTCGGTCGTAGCAAGTGTTTATCTTGCCAATT
GGACAAGAAAACCAATTATGGAAAGCTATGAAAAACAAAAATCCTTTGTCGAAAATGCTAGTCATGAGTTGCGTACACCG
CTTGCTGTTTTGCAGAATCGTTTAGAAAGTCTCTTTAGGCGACCCGATGCTACAATTTTGGATAATAGTGAAAGTATTGC
CGCCAGTCTAGACGAAGTTCGAAATATGCGAATTTTGACCACAAATCTGCTGAATTTGGCACGTCGTGACGATGGTTTGA
AAGTTGAGTTGGAGGATATTCAACCAACGACTTTCAATGAAATCTTTGAAAATTACGATATGATTGCTGAAGAAAATGGC
AAGACATTTGTCGGACATAATTTGGCAGAGCGACCAATCAAATCAGATCGTACATTGTTAAAACAACTGATGACTATCTT
ATTTGATAATGCCATAAAATACACCGACGATGATGGTGTCATTGAATTTACCGTTAAAACAACAGACAAACAAACAATTC
TGACAGTTGCTGATAACGGCCCAGGGATTAGCGACGCTGATAAAGTTAAGATTTTTGACCGTTTTTATCGTGTGGATAAA
GCACGGACACGTCAAAAAGGTGGTTTTGGTCTAGGATTGTCACTTGCTAAGCAAATTGTTGACGTTTTAAAAGGCGATAT
TCAAGTCAAAGATAACCAACCAAAAGGAACTATTTTTGAAGTTCGTTTTAATCGTCATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(227-292)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(336-443)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139QTN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.368

99.327

0.59
  ciaH Streptococcus pneumoniae Rx1

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae D39

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae R6

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae TIGR4

51.467

99.327

0.511