Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FOC71_RS01885 Genome accession   NZ_CP053999
Coordinates   359847..360614 (+) Length   255 a.a.
NCBI ID   WP_003075496.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 354847..365614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS01855 (FOC71_01855) comE 355405..356154 (-) 750 WP_003075488.1 competence system response regulator transcription factor ComE Regulator
  FOC71_RS01860 (FOC71_01860) comD/comD1 356154..357479 (-) 1326 WP_003075490.1 GHKL domain-containing protein Regulator
  FOC71_RS01865 (FOC71_01865) - 357496..357642 (-) 147 WP_003075491.1 bacteriocin -
  FOC71_RS01875 (FOC71_01875) rlmH 357919..358398 (-) 480 WP_003075493.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOC71_RS01880 (FOC71_01880) htrA 358602..359792 (+) 1191 WP_003075495.1 trypsin-like peptidase domain-containing protein Regulator
  FOC71_RS01885 (FOC71_01885) spo0J 359847..360614 (+) 768 WP_003075496.1 ParB/RepB/Spo0J family partition protein Regulator
  FOC71_RS01890 (FOC71_01890) dnaA 360840..362183 (+) 1344 WP_003075498.1 chromosomal replication initiator protein DnaA -
  FOC71_RS01895 (FOC71_01895) dnaN 362339..363475 (+) 1137 WP_003075500.1 DNA polymerase III subunit beta -
  FOC71_RS01900 (FOC71_01900) - 363475..363672 (+) 198 WP_003075502.1 DUF951 domain-containing protein -
  FOC71_RS01905 (FOC71_01905) - 363695..364195 (-) 501 WP_003075505.1 DUF1307 domain-containing protein -
  FOC71_RS01910 (FOC71_01910) ychF 364341..365456 (+) 1116 WP_003075507.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29647.05 Da        Isoelectric Point: 9.1061

>NTDB_id=449995 FOC71_RS01885 WP_003075496.1 359847..360614(+) (spo0J) [Streptococcus intermedius strain FDAARGOS_769]
MEKYQYITLNDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
LTDDEMIKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPSNIIEAVKEGNISQGHA
RLLINLSEKEQNHWFEKILSQELSVRKLEKQLHPKRTKTVTKNKNQLFIKEEEERLKKIFGTDISLQFSKQSQSGKICIH
FSNQEEYQRIIDSFT

Nucleotide


Download         Length: 768 bp        

>NTDB_id=449995 FOC71_RS01885 WP_003075496.1 359847..360614(+) (spo0J) [Streptococcus intermedius strain FDAARGOS_769]
ATGGAAAAATATCAATACATTACACTTAATGACATACAAACCAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAACTTGCTAATTCTATAAAAGAACATGGAATTATTCAGCCCATCATTGTACGAAAATCTCCAATAATTGGTT
ATGAATTACTAGCTGGTGAAAGACGTTTTAGAGCTGCTAAATTAGCAGGTTTAACTAATATACCAGCTATTATAAAAGAA
TTAACAGATGATGAAATGATAAAGCAAGCTATCATTGAAAATTTACAAAGAGAAGACCTCAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAGGGATTGACACACAAAGAAATCGCTTTAACAATGGGAAAATCTCGCCCTTACATTA
CAAATTCTGTTCGCTTATTAAATTTACCATCCAATATCATTGAAGCAGTAAAAGAAGGAAATATCTCTCAAGGACATGCT
CGCCTGCTTATCAATCTCTCAGAAAAAGAGCAAAATCACTGGTTTGAAAAAATTCTATCTCAAGAACTTTCAGTTAGAAA
ACTAGAAAAACAATTGCACCCAAAACGAACAAAAACTGTAACAAAAAATAAAAATCAACTTTTTATCAAAGAAGAAGAAG
AAAGATTAAAAAAGATATTCGGTACAGATATTTCACTCCAATTTTCTAAGCAGTCTCAATCTGGAAAAATTTGTATTCAC
TTTTCAAATCAAGAAGAATATCAAAGAATTATTGACAGCTTTACATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-190)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.562

100

0.518