Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST4134_RS05395 Genome accession   NZ_CP065478
Coordinates   1027361..1027843 (-) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4134     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1022361..1032843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4134_RS05375 (ST4134_05370) pepT 1022842..1024065 (-) 1224 WP_011681190.1 peptidase T -
  ST4134_RS05380 (ST4134_05375) lepB 1024273..1024830 (-) 558 WP_011681191.1 signal peptidase I -
  ST4134_RS05385 (ST4134_05380) - 1024953..1026182 (-) 1230 WP_011681192.1 lipopolysaccharide assembly protein LapB -
  ST4134_RS05390 (ST4134_05385) - 1026172..1027350 (-) 1179 WP_024704144.1 AI-2E family transporter -
  ST4134_RS05395 (ST4134_05390) mutX 1027361..1027843 (-) 483 WP_011681193.1 8-oxo-dGTP diphosphatase Machinery gene
  ST4134_RS05400 (ST4134_05395) ftsX 1027999..1028928 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  ST4134_RS05405 (ST4134_05400) ftsE 1028921..1029613 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  ST4134_RS05415 (ST4134_05410) queG 1030852..1031970 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=447481 ST4134_RS05395 WP_011681193.1 1027361..1027843(-) (mutX) [Streptococcus thermophilus strain 4134]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=447481 ST4134_RS05395 WP_011681193.1 1027361..1027843(-) (mutX) [Streptococcus thermophilus strain 4134]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706