Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MARHY_RS17480 Genome accession   NC_017067
Coordinates   3794934..3795326 (+) Length   130 a.a.
NCBI ID   WP_011787170.1    Uniprot ID   -
Organism   Marinobacter nauticus ATCC 49840     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3789934..3800326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MARHY_RS17450 (MARHY3665) - 3790207..3791226 (-) 1020 WP_022991331.1 aspartate carbamoyltransferase catalytic subunit -
  MARHY_RS17455 (MARHY3666) pyrR 3791254..3791763 (-) 510 WP_011787165.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MARHY_RS17460 (MARHY3667) ruvX 3791783..3792214 (-) 432 WP_031210066.1 Holliday junction resolvase RuvX -
  MARHY_RS17465 (MARHY3668) - 3792207..3792773 (-) 567 WP_011787167.1 YqgE/AlgH family protein -
  MARHY_RS17470 (MARHY3669) - 3792770..3793636 (-) 867 WP_023008698.1 energy transducer TonB -
  MARHY_RS17475 (MARHY3670) gshB 3793683..3794636 (-) 954 WP_014422995.1 glutathione synthase -
  MARHY_RS17480 (MARHY3671) pilG 3794934..3795326 (+) 393 WP_011787170.1 twitching motility response regulator PilG Regulator
  MARHY_RS17485 (MARHY3672) pilH 3795360..3795722 (+) 363 WP_011787171.1 twitching motility response regulator PilH -
  MARHY_RS17490 (MARHY3673) - 3795743..3796288 (+) 546 WP_011787172.1 chemotaxis protein CheW -
  MARHY_RS17495 (MARHY3674) - 3796382..3798457 (+) 2076 WP_011787173.1 methyl-accepting chemotaxis protein -
  MARHY_RS17500 (MARHY3675) - 3798485..3799384 (+) 900 WP_011787174.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14627.92 Da        Isoelectric Point: 5.2241

>NTDB_id=44713 MARHY_RS17480 WP_011787170.1 3794934..3795326(+) (pilG) [Marinobacter nauticus ATCC 49840]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYMPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=44713 MARHY_RS17480 WP_011787170.1 3794934..3795326(+) (pilG) [Marinobacter nauticus ATCC 49840]
ATGGATGACAACTTCGAGAACCTGAAGATCATGGTGATTGACGACAGCAAGACCATTCGTCGCACCGCGGAAACCCTTCT
TAAAAAGGTTGGCTGTGAGGTTATCACTGCCACAGACGGCTTTGACGCTCTGGCCAAGATTGCCGACTCCCAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTGATCAAGAACAATTCCTCTTTTAAA
AAGACGCCGGTTATCATGCTTTCGAGCAAGGACGGCCTGTTCGACAAGGCAAAAGGCCGAATCGTAGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGCAAGGATGAGCTGCTTAACACCATCCGCCAATACATGCCTCAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

39.669

93.077

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment