Detailed information NTG0447016

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HPQ66_RS16415
• Genome accession: NZ_CP053764
• Coordinates: 3382402..3383565 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B268
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3377402..3388565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPQ66_RS16385 (HPQ66_16440)	-	3377667..3378086 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
HPQ66_RS16390 (HPQ66_16445)	comFC	3378160..3378849 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
HPQ66_RS16395 (HPQ66_16450)	-	3378855..3379139 (-)	285	WP_017418816.1	competence protein ComFB	-
HPQ66_RS16400 (HPQ66_16455)	comFA	3379197..3380582 (-)	1386	WP_172615016.1	DEAD/DEAH box helicase	Machinery gene
HPQ66_RS16405 (HPQ66_16460)	-	3380690..3381538 (-)	849	WP_003151387.1	DegV family protein	-
HPQ66_RS16410 (HPQ66_16465)	degU	3381636..3382325 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
HPQ66_RS16415 (HPQ66_16470)	degS	3382402..3383565 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
HPQ66_RS16420 (HPQ66_16475)	-	3383788..3384435 (+)	648	WP_060657503.1	YigZ family protein	-
HPQ66_RS16425 (HPQ66_16480)	-	3384440..3385654 (+)	1215	WP_172615017.1	LCP family protein	-
HPQ66_RS16430 (HPQ66_16485)	-	3385744..3386820 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
HPQ66_RS16435 (HPQ66_16490)	-	3386953..3388149 (-)	1197	WP_077722930.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=447016 HPQ66_RS16415 WP_003151385.1 3382402..3383565(-) (degS) [Bacillus velezensis strain B268]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=447016 HPQ66_RS16415 WP_003151385.1 3382402..3383565(-) (degS) [Bacillus velezensis strain B268]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948