Detailed information NTG0447015

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: I5V48_RS06400
• Genome accession: NZ_CP065430
• Coordinates: 1309244..1310314 (-)
• Length: 356 a.a.
• NCBI ID: WP_043024855.1
• Uniprot ID: -
• Organism: Streptococcus suis strain YZDH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1304244..1315314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5V48_RS12340	-	1304927..1305234 (-)	308	Protein_1245	hypothetical protein	-
I5V48_RS06385 (I5V48_06385)	-	1305343..1305918 (+)	576	WP_231640461.1	IS110 family transposase	-
I5V48_RS12055	-	1305958..1306146 (+)	189	WP_231640462.1	transposase	-
I5V48_RS06390 (I5V48_06390)	-	1306372..1307483 (-)	1112	Protein_1248	IS1182 family transposase	-
I5V48_RS06395 (I5V48_06395)	-	1307666..1309174 (+)	1509	WP_043024854.1	phosphoglucomutase	-
I5V48_RS06400 (I5V48_06400)	xerS	1309244..1310314 (-)	1071	WP_043024855.1	tyrosine recombinase XerS	Machinery gene
I5V48_RS06405 (I5V48_06405)	-	1310548..1310793 (-)	246	WP_043024856.1	zinc-ribbon domain-containing protein	-
I5V48_RS06410 (I5V48_06410)	-	1310981..1312123 (+)	1143	WP_043024857.1	DNA adenine methylase	-
I5V48_RS06415 (I5V48_06415)	-	1312163..1312408 (-)	246	WP_043024858.1	hypothetical protein	-
I5V48_RS06420 (I5V48_06420)	-	1312420..1313106 (-)	687	WP_043024923.1	DNA-methyltransferase	-
I5V48_RS06425 (I5V48_06425)	-	1313173..1314012 (-)	840	WP_043024859.1	hypothetical protein	-
I5V48_RS06430 (I5V48_06430)	-	1314175..1315050 (-)	876	WP_197314992.1	TdeIII family type II restriction endonuclease	-
I5V48_RS06435 (I5V48_06435)	-	1315047..1315259 (-)	213	WP_043024861.1	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41561.71 Da
• Isoelectric Point: 9.2076

>NTDB_id=447015 I5V48_RS06400 WP_043024855.1 1309244..1310314(-) (xerS) [Streptococcus suis strain YZDH1]
MRRELLLEKIEQLKEIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=447015 I5V48_RS06400 WP_043024855.1 1309244..1310314(-) (xerS) [Streptococcus suis strain YZDH1]
ATGCGTCGTGAATTATTATTAGAAAAAATTGAACAGCTAAAAGAAATCATGCCTTGGTATGTCTTGGAATATTACCAATC
AAAGCTGGCTGTGCCTTACAGTTTTACAACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTGCAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCGTTGGATATTCTGGAACATTTGACCAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCCTACTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGCACTCTGTCAGCACTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGATCAGGGTGAGCCCTACTTCT
ATCGCAATGTTATGAAAAAGGTATCCACCAAGAAGAAGAAGGAAACCTTGGCGGCTCGGGCGGAGAATATCAAGCAGAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTTTTGGACTATGTGGACAAGGAATACCAGGTCAATCTCTCCAAACGTGCCCT
CTCCTCCTTCCAAAAAAACAAGGAACGAGACTTGGCGATTTTGGCACTTCTCTTGGCATCTGGTGTTCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGTGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTTTTCCTGTCTGAGTACCGTGGTCTGCCTAACCGCATCGACGCTTCTTCCATTGAAAAAATGGTGGCTA
AGTATTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGCCATACCTTGGCAACTCGCCTCTACGACGCCACC
AAGTCGCAAGTTCTGGTCAGTCACCAGCTGGGTCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831