Detailed information NTG0446700

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: I5Z97_RS01565
• Genome accession: NZ_CP065386
• Coordinates: 302392..303066 (-)
• Length: 224 a.a.
• NCBI ID: WP_021111230.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain LHDR_HPS_1_2
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 297392..308066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5Z97_RS01535 (I5Z97_01535)	lolB	297729..298361 (+)	633	WP_021110345.1	lipoprotein insertase outer membrane protein LolB	-
I5Z97_RS01540 (I5Z97_01540)	ispE	298363..299208 (+)	846	WP_021113204.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	-
I5Z97_RS01545 (I5Z97_01545)	-	299236..300186 (+)	951	WP_005713153.1	ribose-phosphate pyrophosphokinase	-
I5Z97_RS01550 (I5Z97_01550)	pyrD	300433..301440 (+)	1008	WP_035523316.1	quinone-dependent dihydroorotate dehydrogenase	-
I5Z97_RS01555 (I5Z97_01555)	-	301702..301848 (-)	147	WP_021110348.1	hypothetical protein	-
I5Z97_RS01560 (I5Z97_01560)	-	301887..302138 (-)	252	WP_223300025.1	hypothetical protein	-
I5Z97_RS01565 (I5Z97_01565)	crp	302392..303066 (-)	675	WP_021111230.1	cAMP-activated global transcriptional regulator CRP	Regulator
I5Z97_RS01570 (I5Z97_01570)	-	303133..303357 (-)	225	WP_005713165.1	YheU family protein	-
I5Z97_RS01575 (I5Z97_01575)	slmA	303365..303970 (-)	606	WP_021114417.1	nucleoid occlusion factor SlmA	-
I5Z97_RS01580 (I5Z97_01580)	dut	303979..304434 (-)	456	WP_021119359.1	dUTP diphosphatase	-
I5Z97_RS01585 (I5Z97_01585)	coaBC	304431..305636 (-)	1206	WP_035523326.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
I5Z97_RS01590 (I5Z97_01590)	radC	305806..306522 (+)	717	WP_196980285.1	RadC family protein	Machinery gene
I5Z97_RS01595 (I5Z97_01595)	rpmB	306648..306884 (+)	237	WP_006251446.1	50S ribosomal protein L28	-
I5Z97_RS01600 (I5Z97_01600)	rpmG	306896..307066 (+)	171	WP_005624479.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25169.13 Da
• Isoelectric Point: 6.8374

>NTDB_id=446700 I5Z97_RS01565 WP_021111230.1 302392..303066(-) (crp) [Glaesserella parasuis strain LHDR_HPS_1_2]
MQDVSISTAQLEDVSPLPSIHDPAVEWFLTNCHIHRYPAKYTLIHAGEDAESLFYIVSGAVSVFIKDEEGKEMLLTNLGQ
GEFVGEISLFEEKAQPRTAWVRTKGNCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRMTSRQVSNLAFLDVTGRIAQ
TLMNLAKMPDAMTHPQGMQIKITRQEIGQMVGCSRETVGRILKMLEDEGLISAHGKTIVVYGTR

Nucleotide

• Length: 675 bp

>NTDB_id=446700 I5Z97_RS01565 WP_021111230.1 302392..303066(-) (crp) [Glaesserella parasuis strain LHDR_HPS_1_2]
ATGCAAGATGTTTCAATCTCAACCGCACAGCTTGAAGATGTCAGCCCATTACCATCCATTCACGATCCTGCGGTGGAATG
GTTTTTAACTAACTGTCATATTCATCGTTATCCAGCAAAATATACTTTAATTCACGCAGGTGAAGATGCTGAATCACTGT
TTTATATTGTCAGCGGAGCTGTGTCTGTCTTTATCAAGGATGAAGAAGGCAAGGAGATGTTATTAACCAATTTAGGCCAA
GGCGAATTTGTCGGTGAAATCAGCCTTTTTGAAGAAAAGGCTCAGCCTCGCACTGCTTGGGTAAGAACTAAAGGTAACTG
TGAAATTGCTGAAATTTCTTATAAAAAATTCAAGCAATTAGTGCATCTTAATCCAGATATTTTGATGTATTTATCCGCAC
AGATGGCTCGCCGTTTACGAATGACATCAAGACAGGTTAGTAACCTAGCATTTCTTGATGTAACAGGTCGTATTGCTCAA
ACATTGATGAATTTAGCTAAAATGCCTGATGCGATGACTCACCCTCAGGGTATGCAGATTAAAATTACTCGCCAAGAAAT
TGGTCAAATGGTTGGTTGCTCACGAGAAACTGTAGGCCGTATTTTGAAAATGCTTGAGGATGAAGGGTTAATTTCTGCAC
ATGGTAAAACTATCGTTGTGTATGGGACAAGATAA

Domains

Predicted by InterProScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (156-220)

• Cyclic nucleotide-binding domain (cNMP_binding) (35-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	75.369	90.625	0.683
crp	Haemophilus influenzae Rd KW20	72.906	90.625	0.661
crp	Acinetobacter baumannii D1279779	48	89.286	0.429