Detailed information    

insolico Bioinformatically predicted

Overview

Name   ideA   Type   Regulator
Locus tag   HOY68_RS02120 Genome accession   NZ_CP053685
Coordinates   481637..482311 (+) Length   224 a.a.
NCBI ID   WP_048608563.1    Uniprot ID   A0A0M0HVE7
Organism   Proteus mirabilis strain MPE5203     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 476637..487311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HOY68_RS02085 - 477092..477430 (+) 339 WP_002310911.1 hypothetical protein -
  HOY68_RS17830 - 477435..477626 (+) 192 WP_009873362.1 hypothetical protein -
  HOY68_RS02095 - 477638..477907 (+) 270 Protein_408 hypothetical protein -
  HOY68_RS02100 cadR 478371..478778 (-) 408 WP_053409935.1 Cd(II)/Pb(II)-responsive transcriptional regulator -
  HOY68_RS02105 - 478874..479770 (+) 897 WP_053409936.1 cation transporter -
  HOY68_RS02110 lspA 479774..480286 (+) 513 WP_003821921.1 signal peptidase II -
  HOY68_RS02115 - 480308..481595 (+) 1288 Protein_412 ISL3 family transposase -
  HOY68_RS02120 ideA 481637..482311 (+) 675 WP_048608563.1 endonuclease Regulator
  HOY68_RS02125 - 482720..484759 (-) 2040 WP_004249372.1 ATP-binding protein -
  HOY68_RS02130 - 484756..486174 (-) 1419 WP_004249371.1 SIR2 family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26077.09 Da        Isoelectric Point: 7.2404

>NTDB_id=446335 HOY68_RS02120 WP_048608563.1 481637..482311(+) (ideA) [Proteus mirabilis strain MPE5203]
MKSVYPFFIALFAIPAIAEHPTSFSQAKRFAREIYQDNQSTFYCGCSYSNDGAIDAASCGYEPRKQPKRGERLEWEHVVS
AWEIGHQRQCWQNGGRRNCEKNDPEFSKMVSDLHNLVPSVGELNGDRSNFRFGMIPNEPRSYGQCDFEVDFKDRRAEPPA
NRQGDIARIYFYMRDQYGLRLSRQQTQLFEAWSRMDPVDEWEKVRDFKIKTIQGNSNCHVSNSC

Nucleotide


Download         Length: 675 bp        

>NTDB_id=446335 HOY68_RS02120 WP_048608563.1 481637..482311(+) (ideA) [Proteus mirabilis strain MPE5203]
ATTAAATCCGTATACCCTTTCTTTATAGCGTTATTCGCTATACCTGCAATTGCAGAACACCCCACATCGTTCAGTCAGGC
AAAACGATTTGCCCGAGAAATTTACCAAGACAACCAGAGTACGTTTTACTGTGGATGTAGCTATAGCAATGATGGTGCGA
TTGATGCTGCATCTTGCGGATATGAACCAAGAAAGCAACCGAAACGAGGTGAACGCTTAGAGTGGGAACATGTAGTCTCA
GCTTGGGAAATTGGCCATCAACGCCAATGCTGGCAAAATGGTGGTCGTCGGAACTGCGAAAAGAATGATCCTGAGTTTTC
TAAAATGGTTTCGGATCTCCATAACCTCGTACCATCTGTAGGAGAGCTCAATGGGGATAGGTCAAATTTTCGATTTGGCA
TGATTCCGAATGAACCAAGATCCTATGGTCAATGTGATTTCGAAGTTGATTTCAAAGACCGTCGAGCAGAACCACCAGCT
AACCGTCAGGGTGATATTGCTAGAATTTATTTCTACATGCGAGATCAATACGGCCTAAGACTCAGTAGGCAACAAACTCA
GCTATTTGAAGCTTGGTCAAGAATGGACCCTGTTGACGAATGGGAAAAAGTGCGTGATTTTAAGATTAAAACTATTCAAG
GTAACTCTAACTGCCATGTGTCAAATAGCTGTTAA

Domains

Predicted by InterProScan.

Endonuclease I (Endonuclease_1)

(50-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ideA Vibrio cholerae O1 str. 2010EL-1786

92.76

98.661

0.915
  dns Vibrio parahaemolyticus RIMD 2210633

52.381

100

0.54
  dns Aliivibrio fischeri ES114

52.423

100

0.531
  dns Vibrio cholerae strain A1552

50.661

100

0.513
  dns Campylobacter jejuni RM1221

37.674

95.982

0.362