Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ICC24_RS00240 Genome accession   NZ_CP065029
Coordinates   45615..46442 (+) Length   275 a.a.
NCBI ID   WP_003178162.1    Uniprot ID   Q65PI9
Organism   Bacillus licheniformis strain LCDD6     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 40615..51442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS00215 (ICC24_00215) - 41677..43119 (+) 1443 WP_025805857.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ICC24_RS00220 (ICC24_00220) tmk 43116..43754 (+) 639 WP_003178154.1 dTMP kinase -
  ICC24_RS00225 (ICC24_00225) - 43830..44159 (+) 330 WP_003178156.1 cyclic-di-AMP receptor -
  ICC24_RS00230 (ICC24_00230) - 44171..44611 (+) 441 WP_003178158.1 YaaR family protein -
  ICC24_RS00235 (ICC24_00235) holB 44623..45612 (+) 990 WP_003178160.1 DNA polymerase III subunit delta' -
  ICC24_RS00240 (ICC24_00240) yaaT 45615..46442 (+) 828 WP_003178162.1 PSP1 domain-containing protein Regulator
  ICC24_RS00245 (ICC24_00245) yabA 46457..46819 (+) 363 WP_003178164.1 DNA replication initiation control protein YabA -
  ICC24_RS00250 (ICC24_00250) - 46884..47627 (+) 744 WP_003178166.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ICC24_RS00255 (ICC24_00255) - 47614..47907 (+) 294 WP_003178169.1 GIY-YIG nuclease family protein -
  ICC24_RS00260 (ICC24_00260) rsmI 47882..48757 (+) 876 WP_025805862.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ICC24_RS00265 (ICC24_00265) abrB 48806..49096 (-) 291 WP_085959887.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 30998.69 Da        Isoelectric Point: 4.6295

>NTDB_id=445340 ICC24_RS00240 WP_003178162.1 45615..46442(+) (yaaT) [Bacillus licheniformis strain LCDD6]
MYNVIGVRFKKAGKIYYFDPNGFQIDKDSCVIVETVRGVEYGQVVIANKKVDENDVVLPLRKVIRVADERDRLIVEENQE
AALSAFDVCQKKVNEHGLEMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEVIATSSGPAKVVGLNI
LERILQVELTDCDKVVEYTWDELLQEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=445340 ICC24_RS00240 WP_003178162.1 45615..46442(+) (yaaT) [Bacillus licheniformis strain LCDD6]
TTGTACAACGTTATTGGTGTCCGCTTTAAAAAAGCGGGCAAAATATATTATTTCGATCCGAACGGATTTCAGATAGATAA
AGACAGCTGTGTGATCGTCGAAACGGTTCGCGGTGTTGAATACGGGCAGGTTGTCATTGCCAACAAGAAAGTAGACGAGA
ACGATGTCGTGCTGCCTTTAAGAAAAGTGATCAGAGTTGCGGATGAACGCGACCGCCTGATCGTTGAGGAGAATCAAGAA
GCTGCGCTGTCCGCCTTTGATGTCTGCCAGAAAAAGGTTAACGAGCACGGCCTTGAGATGAAACTGGTCGATGTGGAATT
CACTTTTGACCGCAACAAAGTCATTTTTTATTTTACGGCTGATGGAAGAGTCGATTTTAGAGAACTCGTCAAAGATTTGG
CATCGATCTTTAAAACGAGAATCGAGCTGAGACAAATCGGCGTCAGAGATGAAGCGAAGATGCTCGGCGGTATCGGACCG
TGTGGAAGAATGCTTTGCTGTTCCACGTTTTTAGGTGATTTTGAGCCCGTTTCTATTAAAATGGCAAAGGATCAAAATCT
GTCGCTGAATCCGACGAAGATTTCCGGACTATGCGGACGGCTGATGTGCTGTCTAAAGTATGAAAACGATGAATACGAAA
CAGCCAAAGAACAGCTTCCGGATATCGGGGAAGTGATCGCCACGTCCAGCGGCCCGGCAAAAGTCGTCGGGTTGAATATT
CTCGAACGCATTCTCCAGGTTGAACTGACAGACTGCGACAAAGTTGTTGAATATACGTGGGATGAGCTGTTGCAAGAAGG
TGTCGTATCTGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65PI9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

90.909

100

0.909