Detailed information NTG0445050

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: ITP52_RS18095
• Genome accession: NZ_CP064818
• Coordinates: 3583682..3584287 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain SH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3578682..3589287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITP52_RS18060 (ITP52_18060)	-	3578849..3578989 (-)	141	WP_004398683.1	hypothetical protein	-
ITP52_RS18065 (ITP52_18065)	-	3578996..3579547 (-)	552	WP_306420272.1	DUF5412 family protein	-
ITP52_RS18070 (ITP52_18070)	-	3579527..3579649 (+)	123	WP_003229707.1	hypothetical protein	-
ITP52_RS18075 (ITP52_18075)	yrzF	3579695..3580342 (-)	648	WP_003246159.1	phosphotransferase	-
ITP52_RS18080 (ITP52_18080)	iolG	3580580..3581605 (+)	1026	WP_032726305.1	inositol 2-dehydrogenase	-
ITP52_RS18085 (ITP52_18085)	csbX	3581676..3582983 (+)	1308	WP_015483512.1	MFS transporter	-
ITP52_RS18090 (ITP52_18090)	bofC	3583031..3583543 (+)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
ITP52_RS18095 (ITP52_18095)	ruvA	3583682..3584287 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
ITP52_RS18100 (ITP52_18100)	ruvB	3584298..3585302 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ITP52_RS18105 (ITP52_18105)	yrzS	3585295..3585495 (+)	201	WP_003222669.1	DUF2905 domain-containing protein	-
ITP52_RS18110 (ITP52_18110)	queA	3585525..3586553 (+)	1029	WP_041850173.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
ITP52_RS18115 (ITP52_18115)	tgt	3586580..3587725 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
ITP52_RS18120 (ITP52_18120)	yajC	3587762..3588028 (+)	267	WP_004398708.1	preprotein translocase subunit YajC	-
ITP52_RS18125 (ITP52_18125)	-	3588085..3588474 (-)	390	WP_031315243.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=445050 ITP52_RS18095 WP_003229717.1 3583682..3584287(+) (ruvA) [Bacillus subtilis strain SH1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=445050 ITP52_RS18095 WP_003229717.1 3583682..3584287(+) (ruvA) [Bacillus subtilis strain SH1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATAATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408