Detailed information NTG0443929

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ITG72_RS02190
• Genome accession: NZ_CP064395
• Coordinates: 469497..470645 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain SRRSH1408
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 464497..475645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITG72_RS02165 (ITG72_02165)	-	465648..465944 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
ITG72_RS02170 (ITG72_02170)	-	465941..466534 (-)	594	WP_003084544.1	YggT family protein	-
ITG72_RS02175 (ITG72_02175)	proC	466545..467366 (-)	822	WP_031757004.1	pyrroline-5-carboxylate reductase	-
ITG72_RS02180 (ITG72_02180)	-	467378..468070 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
ITG72_RS02185 (ITG72_02185)	pilT	468285..469319 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
ITG72_RS02190 (ITG72_02190)	pilU	469497..470645 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
ITG72_RS02195 (ITG72_02195)	czcD	470653..471552 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
ITG72_RS02200 (ITG72_02200)	-	471707..472111 (+)	405	WP_003084560.1	NINE protein	-
ITG72_RS02205 (ITG72_02205)	-	472354..473727 (+)	1374	WP_003084562.1	pyridoxal-phosphate dependent enzyme	-
ITG72_RS02210 (ITG72_02210)	-	473724..474908 (+)	1185	WP_003100953.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=443929 ITG72_RS02190 WP_003100959.1 469497..470645(+) (pilU) [Pseudomonas aeruginosa strain SRRSH1408]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=443929 ITG72_RS02190 WP_003100959.1 469497..470645(+) (pilU) [Pseudomonas aeruginosa strain SRRSH1408]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGTCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382