Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | SYNPCCP_RS08870 | Genome accession | NC_017039 |
| Coordinates | 1866765..1867592 (+) | Length | 275 a.a. |
| NCBI ID | WP_010872899.1 | Uniprot ID | - |
| Organism | Synechocystis sp. PCC 6803 substr. PCC-P | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1861765..1872592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYNPCCP_RS08845 (SYNPCCP_1696) | - | 1862275..1863015 (+) | 741 | WP_010872894.1 | WecB/TagA/CpsF family glycosyltransferase | - |
| SYNPCCP_RS08850 (SYNPCCP_1697) | - | 1863267..1864031 (+) | 765 | WP_010872895.1 | iron uptake porin | - |
| SYNPCCP_RS08855 (SYNPCCP_1698) | - | 1864061..1864501 (+) | 441 | WP_010872896.1 | hypothetical protein | - |
| SYNPCCP_RS08860 (SYNPCCP_1699) | pilM | 1864686..1865789 (+) | 1104 | WP_010872897.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| SYNPCCP_RS08865 (SYNPCCP_1700) | pilN | 1865871..1866725 (+) | 855 | WP_010872898.1 | PilN domain-containing protein | Machinery gene |
| SYNPCCP_RS08870 (SYNPCCP_1701) | pilO | 1866765..1867592 (+) | 828 | WP_010872899.1 | pilus assembly protein | Machinery gene |
| SYNPCCP_RS08875 (SYNPCCP_1702) | pilQ | 1867688..1870030 (+) | 2343 | WP_020862340.1 | type IV pilus secretin PilQ | Machinery gene |
| SYNPCCP_RS08880 (SYNPCCP_1703) | - | 1870039..1870863 (-) | 825 | WP_010872901.1 | FkbM family methyltransferase | - |
| SYNPCCP_RS08885 (SYNPCCP_1704) | - | 1870883..1871617 (-) | 735 | WP_010872902.1 | FkbM family methyltransferase | - |
Sequence
Protein
Download Length: 275 a.a. Molecular weight: 30066.97 Da Isoelectric Point: 3.9599
>NTDB_id=44358 SYNPCCP_RS08870 WP_010872899.1 1866765..1867592(+) (pilO) [Synechocystis sp. PCC 6803 substr. PCC-P]
MTSYSEEYSSTTTIIDEEFDAGGNYPTAFGITFTPQVSGISLGILGLLAMGYVLLNFVMPALGEYQQLRQDEEAKQAQVD
QQSPEVLMRRLANAEVQLQEAQQRKATVLELYANSEDLNTILYNFNTLFVNRNVKLVSFLPQGDPVVISDDSLGANAKNQ
LKRQTYTISMTGGFSETLALIRDIERLQPLILMKNLRTSLVNPEFPVNVVRDGDTVQVQTDAPDILTTDLTLEVFMPLTP
EEIAALTPPPPPPGQEGQPPAEGQPPAEGQAAPAP
MTSYSEEYSSTTTIIDEEFDAGGNYPTAFGITFTPQVSGISLGILGLLAMGYVLLNFVMPALGEYQQLRQDEEAKQAQVD
QQSPEVLMRRLANAEVQLQEAQQRKATVLELYANSEDLNTILYNFNTLFVNRNVKLVSFLPQGDPVVISDDSLGANAKNQ
LKRQTYTISMTGGFSETLALIRDIERLQPLILMKNLRTSLVNPEFPVNVVRDGDTVQVQTDAPDILTTDLTLEVFMPLTP
EEIAALTPPPPPPGQEGQPPAEGQPPAEGQAAPAP
Nucleotide
Download Length: 828 bp
>NTDB_id=44358 SYNPCCP_RS08870 WP_010872899.1 1866765..1867592(+) (pilO) [Synechocystis sp. PCC 6803 substr. PCC-P]
ATGACCAGCTACAGCGAAGAGTATTCATCAACGACAACAATTATTGATGAGGAATTTGATGCGGGAGGAAATTATCCAAC
TGCATTTGGGATAACCTTCACCCCCCAGGTAAGTGGCATTAGTTTAGGTATTCTTGGCTTGCTGGCCATGGGTTATGTTC
TGCTCAATTTTGTCATGCCAGCTTTGGGAGAATATCAACAACTAAGACAGGACGAAGAAGCTAAACAAGCTCAAGTGGAT
CAGCAGTCCCCGGAAGTGTTGATGCGTCGGCTAGCCAATGCGGAGGTGCAGTTACAGGAAGCTCAACAGCGTAAAGCGAC
AGTGTTGGAACTCTACGCCAATAGCGAGGACTTGAACACAATCCTCTATAACTTCAATACTCTATTCGTAAATAGAAACG
TGAAGTTAGTCAGCTTTTTGCCCCAGGGAGATCCGGTGGTAATCTCCGATGATAGTCTGGGGGCAAACGCAAAAAATCAG
CTTAAACGACAAACTTATACCATTTCCATGACGGGCGGTTTTAGTGAAACCCTGGCATTAATTCGGGATATTGAACGGCT
GCAACCGTTAATTTTGATGAAAAATTTGCGGACTAGCTTGGTTAATCCAGAATTTCCAGTCAATGTGGTTAGGGATGGTG
ACACTGTACAAGTGCAAACTGATGCGCCAGATATCCTAACTACGGATTTAACGTTGGAGGTGTTTATGCCATTAACCCCT
GAGGAGATTGCCGCCCTGACTCCTCCCCCGCCGCCGCCTGGACAGGAGGGTCAACCACCGGCTGAGGGACAACCTCCAGC
GGAAGGACAAGCGGCCCCGGCCCCCTAA
ATGACCAGCTACAGCGAAGAGTATTCATCAACGACAACAATTATTGATGAGGAATTTGATGCGGGAGGAAATTATCCAAC
TGCATTTGGGATAACCTTCACCCCCCAGGTAAGTGGCATTAGTTTAGGTATTCTTGGCTTGCTGGCCATGGGTTATGTTC
TGCTCAATTTTGTCATGCCAGCTTTGGGAGAATATCAACAACTAAGACAGGACGAAGAAGCTAAACAAGCTCAAGTGGAT
CAGCAGTCCCCGGAAGTGTTGATGCGTCGGCTAGCCAATGCGGAGGTGCAGTTACAGGAAGCTCAACAGCGTAAAGCGAC
AGTGTTGGAACTCTACGCCAATAGCGAGGACTTGAACACAATCCTCTATAACTTCAATACTCTATTCGTAAATAGAAACG
TGAAGTTAGTCAGCTTTTTGCCCCAGGGAGATCCGGTGGTAATCTCCGATGATAGTCTGGGGGCAAACGCAAAAAATCAG
CTTAAACGACAAACTTATACCATTTCCATGACGGGCGGTTTTAGTGAAACCCTGGCATTAATTCGGGATATTGAACGGCT
GCAACCGTTAATTTTGATGAAAAATTTGCGGACTAGCTTGGTTAATCCAGAATTTCCAGTCAATGTGGTTAGGGATGGTG
ACACTGTACAAGTGCAAACTGATGCGCCAGATATCCTAACTACGGATTTAACGTTGGAGGTGTTTATGCCATTAACCCCT
GAGGAGATTGCCGCCCTGACTCCTCCCCCGCCGCCGCCTGGACAGGAGGGTCAACCACCGGCTGAGGGACAACCTCCAGC
GGAAGGACAAGCGGCCCCGGCCCCCTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Synechocystis sp. PCC 6803 |
100 |
100 |
1 |