Detailed information NTG0440178

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HHJ56_RS08580
• Genome accession: NZ_CP051642
• Coordinates: 1803467..1804567 (-)
• Length: 366 a.a.
• NCBI ID: WP_035687998.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain ADL-AP01
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1798467..1809567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ56_RS08565 (HHJ56_08565)	glpQ	1799635..1800729 (+)	1095	WP_035687993.1	glycerophosphodiester phosphodiesterase	-
HHJ56_RS08570 (HHJ56_08570)	ftsY	1801288..1802706 (-)	1419	WP_035687996.1	signal recognition particle-docking protein FtsY	-
HHJ56_RS08575 (HHJ56_08575)	rsmD	1802862..1803470 (+)	609	WP_046097259.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HHJ56_RS08580 (HHJ56_08580)	dprA	1803467..1804567 (-)	1101	WP_035687998.1	DNA-processing protein DprA	Machinery gene
HHJ56_RS08585 (HHJ56_08585)	pilW	1804712..1805254 (-)	543	WP_017805302.1	type IV pilus biogenesis/stability protein PilW	-
HHJ56_RS08590 (HHJ56_08590)	-	1805288..1806457 (-)	1170	WP_035688001.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
HHJ56_RS08595 (HHJ56_08595)	-	1806832..1807884 (-)	1053	WP_035688003.1	AI-2E family transporter	-
HHJ56_RS08600 (HHJ56_08600)	glnB	1807887..1808225 (-)	339	WP_017805299.1	nitrogen regulatory protein P-II	-
HHJ56_RS08605 (HHJ56_08605)	mog	1808254..1808832 (-)	579	WP_035688005.1	molybdopterin adenylyltransferase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 40877.67 Da
• Isoelectric Point: 4.8599

>NTDB_id=440178 HHJ56_RS08580 WP_035687998.1 1803467..1804567(-) (dprA) [Avibacterium paragallinarum strain ADL-AP01]
MITNEMLLRLLQIPKLGANTIQKILGEISLTQLLDYDEYAFKQIGWSEKQIQRWFYPERKFIDPALQWAESAGNFLLNFT
DEDYPYLLKQIPSAPPILFLQGNLTALSQPQIAIVGSRYCSNYGEYWAKYFASELSLAGFAITSGLALGIDGFCHQAVVD
IQGQTLAVLGSGLDKVYPAKHRRLAEQIIEHNGTLISEFLPAQAPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREIFALPGNIQNGFSEGCHKLIKQGATLVESVTDILENLPHYQYVTPNYTEQKSPSSANEQLTSEPPSYPELYA
QLSHIPISLDELSARLSLPIDVLLTQLLSLELQQLAVCENGLYRRS

Nucleotide

• Length: 1101 bp

>NTDB_id=440178 HHJ56_RS08580 WP_035687998.1 1803467..1804567(-) (dprA) [Avibacterium paragallinarum strain ADL-AP01]
ATGATAACCAATGAGATGTTACTCCGTTTGCTCCAAATTCCTAAACTTGGAGCAAATACCATTCAAAAAATATTGGGTGA
AATTAGTCTTACACAGCTTTTAGATTATGATGAATACGCGTTTAAACAGATTGGTTGGTCAGAAAAGCAAATTCAACGTT
GGTTTTACCCAGAACGAAAATTCATTGATCCTGCGTTACAATGGGCAGAAAGTGCGGGTAATTTTTTGCTTAATTTTACC
GATGAAGATTACCCTTATTTGCTGAAGCAAATTCCCTCCGCCCCGCCGATTTTATTTTTGCAAGGAAATTTGACCGCACT
TTCTCAACCACAAATTGCAATAGTAGGTAGCCGTTATTGCTCGAATTATGGGGAATATTGGGCGAAGTATTTTGCTTCAG
AGTTGAGTCTTGCGGGCTTTGCGATAACCAGTGGACTAGCTTTAGGGATCGACGGATTTTGTCATCAAGCCGTGGTGGAT
ATTCAAGGGCAAACGCTGGCGGTGCTTGGAAGTGGGTTGGATAAGGTGTATCCTGCAAAACATCGCCGTTTGGCTGAGCA
AATTATTGAGCATAACGGCACATTGATTTCCGAATTTCTCCCCGCGCAAGCGCCCGTTGCGGAGAATTTCCCACGCCGAA
ACCGTATTATTAGCGGGCTTTCGCTTGGCACGCTAATTATTGAAGCCACCGAGCGGAGCGGTTCACTCATTACGGCTCGT
TATGCGTTGGAGCAAAACCGTGAGATCTTTGCCTTGCCGGGCAATATTCAAAATGGCTTTAGTGAGGGCTGTCATAAGCT
CATCAAACAAGGGGCGACATTAGTGGAGAGCGTGACGGATATTTTAGAAAATCTCCCACATTATCAGTATGTTACACCGA
ATTATACCGAACAGAAATCGCCATCGTCGGCGAACGAGCAGCTAACTTCAGAGCCACCAAGTTATCCCGAACTTTACGCT
CAATTAAGCCACATTCCCATTAGCCTTGATGAACTTTCAGCCCGTTTGTCATTGCCGATTGATGTCTTATTAACCCAATT
ATTAAGTTTAGAATTGCAACAATTAGCGGTTTGTGAAAATGGGCTGTATCGGCGAAGTTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (312-357)

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	62.973	100	0.637
dprA	Glaesserella parasuis strain SC1401	57.02	95.355	0.544
dprA	Vibrio cholerae strain A1552	43.443	100	0.434
dprA	Vibrio campbellii strain DS40M4	42.061	98.087	0.413
dprA	Legionella pneumophila strain ERS1305867	40.437	100	0.404