Detailed information
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | HF085_RS08420 | Genome accession | NZ_CP051479 |
| Coordinates | 1674815..1675318 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain NGA76 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1669815..1680318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF085_RS08385 (HF085_01710) | - | 1669852..1670115 (+) | 264 | WP_103148498.1 | helix-turn-helix transcriptional regulator | - |
| HF085_RS08390 (HF085_01705) | - | 1670253..1670825 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| HF085_RS08395 (HF085_01700) | - | 1671006..1671374 (-) | 369 | WP_000849171.1 | YxeA family protein | - |
| HF085_RS08400 (HF085_01695) | selX | 1671743..1672354 (-) | 612 | WP_000475315.1 | staphylococcal enterotoxin-like toxin X | - |
| HF085_RS08405 (HF085_01690) | - | 1672554..1673273 (+) | 720 | Protein_1620 | tyrosine-type recombinase/integrase | - |
| HF085_RS08410 (HF085_01685) | - | 1673279..1674286 (+) | 1008 | WP_001080633.1 | Abi family protein | - |
| HF085_RS08415 (HF085_01680) | rpsR | 1674521..1674763 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| HF085_RS08420 (HF085_01675) | ssbA | 1674815..1675318 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| HF085_RS08425 (HF085_01670) | rpsF | 1675339..1675635 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| HF085_RS08430 (HF085_01665) | - | 1675879..1676070 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| HF085_RS08435 (HF085_01660) | ychF | 1676156..1677253 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| HF085_RS08440 (HF085_01655) | - | 1677265..1677468 (-) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| HF085_RS08445 (HF085_01650) | - | 1677498..1678379 (-) | 882 | WP_001077600.1 | mechanosensitive ion channel family protein | - |
| HF085_RS08450 (HF085_01645) | - | 1678536..1679381 (-) | 846 | WP_001566903.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=438796 HF085_RS08420 WP_000934799.1 1674815..1675318(-) (ssbA) [Staphylococcus aureus strain NGA76]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=438796 HF085_RS08420 WP_000934799.1 1674815..1675318(-) (ssbA) [Staphylococcus aureus strain NGA76]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |