Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   HGD77_RS14550 Genome accession   NZ_CP051208
Coordinates   3011851..3012990 (+) Length   379 a.a.
NCBI ID   WP_005105145.1    Uniprot ID   -
Organism   Acinetobacter sp. NEB149     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3006851..3017990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGD77_RS14530 (HGD77_14535) - 3007326..3009413 (-) 2088 WP_005105149.1 TonB-dependent copper receptor -
  HGD77_RS14535 (HGD77_14540) - 3009486..3009896 (-) 411 WP_004644876.1 DUF2946 family protein -
  HGD77_RS14540 (HGD77_14545) def 3009989..3010519 (-) 531 WP_004644875.1 peptide deformylase -
  HGD77_RS14545 (HGD77_14550) tsaP 3010640..3011794 (+) 1155 WP_005105146.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  HGD77_RS14550 (HGD77_14555) dprA 3011851..3012990 (+) 1140 WP_005105145.1 DNA-processing protein DprA Machinery gene
  HGD77_RS14555 (HGD77_14560) - 3013032..3013601 (+) 570 WP_005105144.1 L-threonylcarbamoyladenylate synthase -
  HGD77_RS14560 (HGD77_14565) - 3014046..3014942 (-) 897 WP_168730920.1 DMT family transporter -
  HGD77_RS14565 (HGD77_14570) - 3015133..3015678 (+) 546 WP_005105142.1 glutathione peroxidase -
  HGD77_RS14570 (HGD77_14575) - 3016004..3016603 (+) 600 WP_004644869.1 hypothetical protein -
  HGD77_RS14575 (HGD77_14580) - 3016745..3017761 (+) 1017 WP_168730921.1 pirin family protein -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42605.60 Da        Isoelectric Point: 6.7195

>NTDB_id=436959 HGD77_RS14550 WP_005105145.1 3011851..3012990(+) (dprA) [Acinetobacter sp. NEB149]
MLNPLSRAQLETITLWYLVQHSLSSFYKISQHYAELANAIQQDQVPVWQALGIHVNHVQRLKELHLPEAQQKFQRCLQQI
QQDSDFILLHSDPHYPQQLHPYVDKPPIIFGQGRPDTLLQAQIAIVGSRKPSPHGRQVAYDFAFYLSEQGFYINSGLAYG
IDEAAHRAALQHQGTIAVMATGLDQTYPAQHQSLRQQIIEYGGAVISEFLPDTLPLQHHFPRRNRIVSGLSLGVIVAEAA
LKSGSLITAKLAAEQGKTVFAIPGHIYSEHYQGCHQLIREGAILIDHPQQVIEELALATQWQALENTTKTKVTEATSQQI
PPHLLSLYNQLDWVGQTLDQLGMQVQQEVSSLTSQLMELELLGFCTQQAGLYLRCRILK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=436959 HGD77_RS14550 WP_005105145.1 3011851..3012990(+) (dprA) [Acinetobacter sp. NEB149]
ATGCTGAACCCGTTATCACGCGCGCAACTGGAAACAATTACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGTTTTTA
TAAAATCAGTCAACACTATGCCGAACTGGCCAATGCCATTCAGCAGGATCAGGTACCCGTCTGGCAGGCACTCGGTATTC
ATGTCAATCATGTGCAGCGCTTAAAAGAGTTACACCTCCCAGAAGCGCAACAGAAATTTCAGCGTTGTCTGCAACAGATC
CAGCAGGATAGCGATTTTATTTTATTGCATAGCGATCCGCATTACCCGCAGCAGTTGCATCCTTATGTAGATAAACCACC
GATCATTTTTGGTCAAGGTCGACCTGATACCCTGCTTCAGGCACAGATTGCAATTGTGGGCAGTCGCAAACCCAGTCCAC
ACGGCCGGCAAGTAGCTTATGACTTTGCTTTTTATTTGAGTGAACAGGGTTTCTATATCAATAGCGGTCTGGCATACGGT
ATTGATGAAGCAGCGCATCGGGCTGCGTTACAGCATCAAGGCACGATTGCGGTGATGGCGACCGGACTGGATCAAACCTA
TCCAGCACAACATCAATCACTACGCCAGCAAATCATTGAGTACGGTGGTGCAGTAATCAGTGAGTTTCTACCAGATACGC
TGCCTTTGCAGCACCATTTCCCACGGCGCAACCGAATCGTCAGTGGTTTAAGTCTAGGTGTGATTGTGGCAGAAGCTGCA
TTAAAAAGTGGTTCTCTGATTACGGCTAAACTGGCAGCTGAGCAAGGTAAAACTGTGTTTGCCATTCCGGGACATATTTA
CAGCGAGCATTATCAGGGTTGTCACCAACTGATTCGTGAGGGTGCGATTCTGATTGATCATCCACAGCAGGTCATCGAAG
AACTGGCACTGGCGACGCAATGGCAGGCTTTAGAAAATACCACCAAAACGAAAGTTACTGAAGCAACATCACAGCAAATT
CCACCGCATCTGCTCAGTCTGTATAACCAGCTGGACTGGGTGGGACAGACTCTGGATCAGCTGGGAATGCAGGTGCAGCA
AGAGGTATCTTCCCTGACCAGTCAACTGATGGAACTGGAGTTACTCGGGTTTTGCACCCAGCAAGCCGGCCTGTATCTAC
GTTGTCGGATTCTCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.298

99.208

0.628

  dprA Acinetobacter baumannii D1279779

62.234

99.208

0.617

  dprA Acinetobacter baylyi ADP1

58.421

100

0.586