Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | HIB_RS02875 | Genome accession | NC_016809 |
| Coordinates | 553151..553657 (-) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae 10810 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 548151..558657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HIB_RS02845 (HIB_05410) | nudC | 548644..549438 (-) | 795 | WP_015701644.1 | NAD(+) diphosphatase | - |
| HIB_RS02850 (HIB_05420) | nfuA | 549505..550101 (-) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| HIB_RS02855 (HIB_05430) | - | 550177..550863 (-) | 687 | WP_015701645.1 | ComF family protein | - |
| HIB_RS02860 (HIB_05440) | comE | 550876..552213 (-) | 1338 | WP_015701646.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| HIB_RS02865 (HIB_05450) | comD | 552223..552636 (-) | 414 | WP_015701647.1 | pilus assembly protein PilP | Machinery gene |
| HIB_RS02870 (HIB_05460) | comC | 552633..553154 (-) | 522 | WP_015701648.1 | competence protein ComC | Machinery gene |
| HIB_RS02875 (HIB_05470) | comB | 553151..553657 (-) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| HIB_RS02880 (HIB_05480) | comA | 553658..554455 (-) | 798 | WP_005693722.1 | competence protein A | Machinery gene |
| HIB_RS02885 (HIB_05490) | - | 554554..557148 (+) | 2595 | WP_015701649.1 | penicillin-binding protein 1A | - |
| HIB_RS02890 (HIB_05500) | - | 557225..558070 (+) | 846 | WP_015701650.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| HIB_RS02895 (HIB_05510) | - | 558223..558552 (+) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=43603 HIB_RS02875 WP_011272049.1 553151..553657(-) (comB) [Haemophilus influenzae 10810]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=43603 HIB_RS02875 WP_011272049.1 553151..553657(-) (comB) [Haemophilus influenzae 10810]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |