Detailed information NTG0434154

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HCU65_RS17945
• Genome accession: NZ_CP050705
• Coordinates: 3600025..3601188 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain PENSV20
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3595025..3606188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HCU65_RS17915 (HCU65_17960)	-	3595276..3595695 (-)	420	WP_219946697.1	TIGR03826 family flagellar region protein	-
HCU65_RS17920 (HCU65_17965)	comFC	3595767..3596489 (-)	723	WP_258235433.1	double zinc ribbon domain-containing protein	Machinery gene
HCU65_RS17925 (HCU65_17970)	-	3596453..3596749 (-)	297	WP_003326719.1	late competence development ComFB family protein	-
HCU65_RS17930 (HCU65_17975)	comFA	3596806..3598203 (-)	1398	WP_003326717.1	ATP-dependent helicase ComFA	Machinery gene
HCU65_RS17935 (HCU65_17980)	-	3598310..3599152 (-)	843	WP_003326716.1	DegV family protein	-
HCU65_RS17940 (HCU65_17985)	degU	3599259..3599948 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
HCU65_RS17945 (HCU65_17990)	degS	3600025..3601188 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
HCU65_RS17950 (HCU65_17995)	-	3601406..3602059 (+)	654	WP_003326713.1	YigZ family protein	-
HCU65_RS17955 (HCU65_18000)	-	3602059..3603315 (+)	1257	WP_219946698.1	LCP family protein	-
HCU65_RS17960 (HCU65_18005)	-	3603406..3604482 (-)	1077	WP_003326711.1	MraY family glycosyltransferase	-
HCU65_RS17965 (HCU65_18010)	-	3604623..3605813 (-)	1191	WP_219946699.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=434154 HCU65_RS17945 WP_003326714.1 3600025..3601188(-) (degS) [Bacillus atrophaeus strain PENSV20]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=434154 HCU65_RS17945 WP_003326714.1 3600025..3601188(-) (degS) [Bacillus atrophaeus strain PENSV20]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATTGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCAGGCTGTTAGGCCTTCAGGAAATTATTGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAGGATTTGCGGCAAGTCGGGTTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTGATGATGAGATCTGAATTAATCGAACGAATCTTTCGCGACCGGG
GGACTGAAGACGGTTTTCAGGAAATTAAAAATCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACGCTGAGAAAATATCTTTATACAACCGAGGAGTA
CAACGGAAAGGTCAAAATACATTTTCAGTGCATCGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
ATCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGATTTGCTTGAGGGGACTATTACGATAGACTCTAAAATAGGTCTTG
GGACATTCATCATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959