Detailed information NTG0432983

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HCC49_RS16650
• Genome accession: NZ_CP050462
• Coordinates: 3364197..3365360 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Htq6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3359197..3370360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HCC49_RS16620 (HCC49_16620)	-	3359462..3359881 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
HCC49_RS16625 (HCC49_16625)	comFC	3359955..3360644 (-)	690	WP_210160282.1	ComF family protein	Machinery gene
HCC49_RS16630 (HCC49_16630)	-	3360650..3360934 (-)	285	WP_017418816.1	competence protein ComFB	-
HCC49_RS16635 (HCC49_16635)	comFA	3360992..3362377 (-)	1386	WP_167860473.1	DEAD/DEAH box helicase	Machinery gene
HCC49_RS16640 (HCC49_16640)	-	3362485..3363333 (-)	849	WP_003151387.1	DegV family protein	-
HCC49_RS16645 (HCC49_16645)	degU	3363431..3364120 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
HCC49_RS16650 (HCC49_16650)	degS	3364197..3365360 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
HCC49_RS16655 (HCC49_16655)	-	3365583..3366230 (+)	648	WP_060657503.1	YigZ family protein	-
HCC49_RS16660 (HCC49_16660)	-	3366235..3367410 (+)	1176	WP_146275636.1	LCP family protein	-
HCC49_RS16665 (HCC49_16665)	-	3367500..3368576 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
HCC49_RS16670 (HCC49_16670)	-	3368709..3369905 (-)	1197	WP_167860474.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=432983 HCC49_RS16650 WP_003151385.1 3364197..3365360(-) (degS) [Bacillus velezensis strain Htq6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=432983 HCC49_RS16650 WP_003151385.1 3364197..3365360(-) (degS) [Bacillus velezensis strain Htq6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948