Detailed information NTG0432602

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HB368_RS01560
• Genome accession: NZ_CP050425
• Coordinates: 327750..328808 (+)
• Length: 352 a.a.
• NCBI ID: WP_005119265.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain PM194188
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 322750..333808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB368_RS01545 (HB368_01545)	-	323857..324189 (+)	333	WP_000169603.1	hypothetical protein	-
HB368_RS01550 (HB368_01550)	-	324192..325016 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
HB368_RS01555 (HB368_01555)	ponA	325034..327589 (-)	2556	WP_000736686.1	penicillin-binding protein PBP1a	-
HB368_RS01560 (HB368_01560)	pilM	327750..328808 (+)	1059	WP_005119265.1	pilus assembly protein PilM	Machinery gene
HB368_RS01565 (HB368_01565)	pilN	328808..329449 (+)	642	WP_163050480.1	PilN domain-containing protein	Machinery gene
HB368_RS01570 (HB368_01570)	pilO	329446..330186 (+)	741	WP_000076097.1	type 4a pilus biogenesis protein PilO	Machinery gene
HB368_RS01575 (HB368_01575)	pilP	330197..330724 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
HB368_RS01580 (HB368_01580)	pilQ	330787..332952 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
HB368_RS01585 (HB368_01585)	aroK	332964..333533 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39000.54 Da
• Isoelectric Point: 4.4618

>NTDB_id=432602 HB368_RS01560 WP_005119265.1 327750..328808(+) (pilM) [Acinetobacter baumannii strain PM194188]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDSEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
VDLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=432602 HB368_RS01560 WP_005119265.1 327750..328808(+) (pilM) [Acinetobacter baumannii strain PM194188]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTCTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GTAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.432	100	0.994
comM	Acinetobacter nosocomialis M2	98.58	100	0.986
comM	Acinetobacter baylyi ADP1	80.966	100	0.81
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418