Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   HBA50_RS07285 Genome accession   NZ_CP050133
Coordinates   1465781..1466443 (+) Length   220 a.a.
NCBI ID   WP_045499063.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1460781..1471443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS07245 (HBA50_07245) - 1460806..1461072 (-) 267 WP_045499076.1 DUF3165 family protein -
  HBA50_RS07250 (HBA50_07250) typA 1461107..1462954 (-) 1848 WP_005590809.1 translational GTPase TypA -
  HBA50_RS07255 (HBA50_07255) - 1463150..1463872 (+) 723 WP_045499074.1 16S rRNA pseudouridine(516) synthase -
  HBA50_RS07260 (HBA50_07260) - 1463911..1464105 (-) 195 WP_080940877.1 hypothetical protein -
  HBA50_RS07265 (HBA50_07265) - 1464118..1464498 (-) 381 WP_045499072.1 rhodanese-like domain-containing protein -
  HBA50_RS07270 (HBA50_07270) - 1464500..1464718 (-) 219 WP_045499069.1 YqgQ family protein -
  HBA50_RS07280 (HBA50_07280) - 1465099..1465614 (-) 516 WP_045499066.1 DNA starvation/stationary phase protection protein -
  HBA50_RS07285 (HBA50_07285) cclA/cilC 1465781..1466443 (+) 663 WP_045499063.1 A24 family peptidase Machinery gene
  HBA50_RS07290 (HBA50_07290) trpA 1466412..1467191 (-) 780 WP_045499060.1 tryptophan synthase subunit alpha -
  HBA50_RS07295 (HBA50_07295) trpB 1467184..1468407 (-) 1224 WP_045499057.1 tryptophan synthase subunit beta -
  HBA50_RS07300 (HBA50_07300) - 1468397..1468984 (-) 588 WP_045499054.1 phosphoribosylanthranilate isomerase -
  HBA50_RS07305 (HBA50_07305) trpC 1468971..1469738 (-) 768 WP_045499051.1 indole-3-glycerol phosphate synthase TrpC -
  HBA50_RS07310 (HBA50_07310) trpD 1469735..1470739 (-) 1005 WP_045499049.1 anthranilate phosphoribosyltransferase -
  HBA50_RS07315 (HBA50_07315) - 1470750..1471313 (-) 564 WP_045499046.1 aminodeoxychorismate/anthranilate synthase component II -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 24855.29 Da        Isoelectric Point: 8.6755

>NTDB_id=430227 HBA50_RS07285 WP_045499063.1 1465781..1466443(+) (cclA/cilC) [Streptococcus cristatus ATCC 51100]
MIHLYFFLVGTILASFLGLVIDRFPAQSIISPSSHCDNCKQMLKARDLIPILSQLLNGFRCRFCKIRLPIWYAAFELVLG
LLFLSWSLGYLPLAQLLLLTMGLTLAIYDQREQEYPLLVWLIFQFLLMATAGINPLMLFFLTLGLLAFFFNLRIGAGDFL
FLASCSAIFSLTEILILIQIASFSGLACFCFKKKKDRLAFVPCLLFGVVVIISYKLLLLG

Nucleotide


Download         Length: 663 bp        

>NTDB_id=430227 HBA50_RS07285 WP_045499063.1 1465781..1466443(+) (cclA/cilC) [Streptococcus cristatus ATCC 51100]
ATGATACATCTATACTTTTTTCTGGTCGGAACGATTTTAGCCTCATTTCTAGGCTTGGTCATTGACCGCTTCCCTGCACA
GTCCATCATCTCTCCAAGCAGTCACTGTGACAACTGCAAGCAGATGCTCAAAGCACGGGATTTGATTCCTATCCTTTCTC
AGCTTCTTAATGGCTTCCGTTGCCGTTTCTGCAAGATCCGCCTTCCTATCTGGTATGCTGCTTTTGAGTTAGTGCTGGGC
TTACTTTTTCTAAGCTGGAGTTTAGGCTATCTTCCGCTAGCCCAGCTCTTACTGCTAACTATGGGCTTGACCTTGGCCAT
CTACGATCAGCGCGAGCAAGAATACCCCCTTCTGGTCTGGCTAATCTTTCAGTTTTTGCTGATGGCGACAGCGGGCATCA
ATCCGCTCATGCTCTTCTTTTTAACCTTGGGACTTCTAGCCTTCTTTTTTAATCTTCGTATTGGAGCTGGCGACTTTCTC
TTTCTAGCTTCCTGCTCTGCTATTTTCAGCCTAACAGAGATTCTCATTCTTATCCAAATAGCTAGCTTCTCTGGCCTCGC
CTGTTTCTGCTTTAAAAAGAAAAAAGACAGGCTAGCATTTGTACCCTGTCTTTTGTTTGGTGTGGTGGTGATTATTTCTT
ATAAGCTGCTGCTTCTTGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

65.753

99.545

0.655

  cclA/cilC Streptococcus mitis SK321

64.84

99.545

0.645

  cclA/cilC Streptococcus pneumoniae TIGR4

63.47

99.545

0.632

  cclA/cilC Streptococcus pneumoniae Rx1

63.014

99.545

0.627

  cclA/cilC Streptococcus pneumoniae D39

63.014

99.545

0.627

  cclA/cilC Streptococcus pneumoniae R6

63.014

99.545

0.627