Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   G8D99_RS14675 Genome accession   NZ_CP049916
Coordinates   3215254..3216471 (+) Length   405 a.a.
NCBI ID   WP_166327146.1    Uniprot ID   A0A6G8S7M5
Organism   Acinetobacter lanii strain 185     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3210254..3221471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS14655 (G8D99_14655) - 3211346..3211948 (-) 603 WP_166327138.1 TetR/AcrR family transcriptional regulator -
  G8D99_RS14660 (G8D99_14660) - 3212091..3213299 (+) 1209 WP_166327140.1 oxygenase MpaB family protein -
  G8D99_RS14665 (G8D99_14665) def 3213403..3213933 (-) 531 WP_166327142.1 peptide deformylase -
  G8D99_RS14670 (G8D99_14670) tsaP 3214056..3215216 (+) 1161 WP_166327144.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  G8D99_RS14675 (G8D99_14675) dprA 3215254..3216471 (+) 1218 WP_166327146.1 DNA-processing protein DprA Machinery gene
  G8D99_RS14680 (G8D99_14680) - 3216512..3217081 (+) 570 WP_166327148.1 L-threonylcarbamoyladenylate synthase -
  G8D99_RS14685 (G8D99_14685) - 3217609..3218535 (-) 927 WP_166327150.1 DMT family transporter -
  G8D99_RS14690 (G8D99_14690) - 3219028..3219588 (+) 561 WP_166327152.1 hypothetical protein -
  G8D99_RS14695 (G8D99_14695) - 3219806..3220348 (+) 543 WP_166327154.1 glutathione peroxidase -
  G8D99_RS14700 (G8D99_14700) - 3220787..3221179 (+) 393 WP_166327156.1 RcnB family protein -

Sequence


Protein


Download         Length: 405 a.a.        Molecular weight: 45351.47 Da        Isoelectric Point: 6.6312

>NTDB_id=428657 G8D99_RS14675 WP_166327146.1 3215254..3216471(+) (dprA) [Acinetobacter lanii strain 185]
MLNEISEVHLNHIKLWYLVQHSLSSFQKMIQYFGSAQQAIQPKNIANWPSLKLHKNHLERAKEFYTDAGQFKFQQCLDKI
QSHSDFILIDTDLYYPKQLLPYADRPPILFGKGALQNLSQPQIAIVGSRKPSPHGKQVAYDFAYYLSEKGFFISSGLAQG
IDEAAHLGALKNHRTIAVIGTGLDQVYPSQNQQLQAQILQKSGTIISEFLPETKPLQHNFPRRNRIVSGLSLGVLVAEAK
LDSGSLITAQAAANQGKTTFAIPGHIYSEYHQGCHQLIREGAILVDHPEQIIEDLALPTQWQHNQNLETQLQPNTSVSTH
THTAQATANVVQASLLTQSLDFQPELPEHLFKLYQQLDWIGQDLDVLASTLDQDAAELTSALMELELMGLAIQQNGLYLR
CRPSH

Nucleotide


Download         Length: 1218 bp        

>NTDB_id=428657 G8D99_RS14675 WP_166327146.1 3215254..3216471(+) (dprA) [Acinetobacter lanii strain 185]
ATGTTGAATGAGATCTCTGAAGTTCATTTGAATCACATCAAACTTTGGTATCTCGTTCAACATTCGTTGTCTTCTTTTCA
AAAAATGATTCAATATTTTGGTTCTGCGCAGCAGGCAATTCAACCGAAAAATATTGCCAATTGGCCCAGCTTAAAACTGC
ATAAAAATCATTTGGAACGTGCCAAAGAATTCTACACAGATGCTGGTCAATTTAAATTTCAACAATGCCTCGATAAAATT
CAAAGCCATAGCGATTTTATTTTAATTGATACTGATCTGTATTATCCCAAACAATTGCTTCCTTACGCCGATCGTCCTCC
GATTCTGTTTGGTAAAGGGGCGTTGCAAAATTTAAGTCAACCCCAAATTGCCATTGTCGGCAGTCGCAAACCCAGTCCAC
ATGGCAAACAAGTCGCCTACGACTTTGCTTATTATCTGAGTGAAAAAGGCTTTTTCATTAGCAGTGGTTTGGCACAAGGC
ATCGATGAAGCTGCGCATTTGGGGGCGCTGAAGAACCATCGCACCATCGCGGTGATCGGCACAGGGCTGGATCAAGTTTA
CCCGAGCCAAAATCAGCAGTTACAAGCGCAAATCTTGCAAAAATCAGGCACCATTATTTCCGAATTTTTACCTGAGACCA
AACCTCTACAACACAATTTTCCACGGCGAAACCGTATTGTGAGTGGTCTAAGCTTAGGTGTTTTGGTGGCTGAAGCCAAG
TTAGACAGTGGCTCACTGATTACCGCCCAAGCCGCTGCCAATCAAGGTAAAACCACCTTTGCCATTCCGGGGCATATTTA
CAGCGAATACCATCAAGGTTGCCATCAATTGATTCGTGAAGGCGCAATATTGGTGGATCACCCTGAACAGATTATTGAAG
ATTTAGCGTTACCGACCCAATGGCAACACAATCAAAACCTTGAAACGCAATTACAGCCGAATACTTCTGTTTCTACACAT
ACACATACCGCTCAAGCCACGGCCAATGTCGTGCAAGCAAGCTTGCTGACGCAAAGTCTAGATTTTCAACCGGAGCTGCC
TGAGCATTTGTTTAAGTTGTATCAACAACTCGATTGGATTGGACAAGATTTAGATGTGCTTGCCTCAACCCTCGATCAAG
ACGCGGCAGAACTGACCAGTGCCTTAATGGAATTGGAACTCATGGGCTTAGCAATTCAACAGAATGGGCTTTATCTGCGT
TGCCGACCAAGCCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G8S7M5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.184

99.259

0.627

  dprA Acinetobacter baumannii D1279779

62.687

99.259

0.622

  dprA Acinetobacter baylyi ADP1

59.453

99.259

0.59