Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   G8D99_RS14670 Genome accession   NZ_CP049916
Coordinates   3214056..3215216 (+) Length   386 a.a.
NCBI ID   WP_166327144.1    Uniprot ID   A0A6G8S869
Organism   Acinetobacter lanii strain 185     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3209056..3220216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS14655 (G8D99_14655) - 3211346..3211948 (-) 603 WP_166327138.1 TetR/AcrR family transcriptional regulator -
  G8D99_RS14660 (G8D99_14660) - 3212091..3213299 (+) 1209 WP_166327140.1 oxygenase MpaB family protein -
  G8D99_RS14665 (G8D99_14665) def 3213403..3213933 (-) 531 WP_166327142.1 peptide deformylase -
  G8D99_RS14670 (G8D99_14670) tsaP 3214056..3215216 (+) 1161 WP_166327144.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  G8D99_RS14675 (G8D99_14675) dprA 3215254..3216471 (+) 1218 WP_166327146.1 DNA-processing protein DprA Machinery gene
  G8D99_RS14680 (G8D99_14680) - 3216512..3217081 (+) 570 WP_166327148.1 L-threonylcarbamoyladenylate synthase -
  G8D99_RS14685 (G8D99_14685) - 3217609..3218535 (-) 927 WP_166327150.1 DMT family transporter -
  G8D99_RS14690 (G8D99_14690) - 3219028..3219588 (+) 561 WP_166327152.1 hypothetical protein -

Sequence

Protein


Download         Length: 386 a.a.        Molecular weight: 42162.27 Da        Isoelectric Point: 9.2127

>NTDB_id=428656 G8D99_RS14670 WP_166327144.1 3214056..3215216(+) (tsaP) [Acinetobacter lanii strain 185]
MKKLFTGTPPLRASGFKKHCVALAICMSAGLFTTQIIHASPNNTPPALKASAPNVYIVKKGDTLWDISGKFLRSPWRWKE
IWASNRHVKNPHWIYPGDRLLLCTLDGRPLIGKDEGDGCEGVIRRHRGGTSLQPQVRVESLNNTIPIIPLSQIEQWLDHG
LILSPESIQSTPYILGSADNRVITGKGQTVYVRGNGIEVGQNYGVFRESEPYTIIDHTGKRPVKVVKAVELVEVAAGTAV
ASENDVTTLELTDSFNAEVRSGDHVLPRYNPELPSLFFPTATNDIVEGGQIVRVMGSIGTAAQRSVVTLDRGAVHGAKTG
HVLSIFQQGEVVRDPKTKEAIKLPNQRVGNLMIFKTFDQYSYAYVLDSSLPIKVGASVQAPAIAEN

Nucleotide


Download         Length: 1161 bp        

>NTDB_id=428656 G8D99_RS14670 WP_166327144.1 3214056..3215216(+) (tsaP) [Acinetobacter lanii strain 185]
ATGAAAAAGCTTTTCACTGGCACACCTCCTTTACGTGCCTCGGGGTTTAAAAAACACTGTGTTGCGCTGGCAATTTGCAT
GAGCGCTGGACTGTTCACTACTCAAATAATACATGCCAGTCCAAACAACACACCTCCTGCTTTAAAAGCCAGTGCACCGA
ATGTGTATATCGTGAAAAAAGGCGATACGCTTTGGGATATTTCAGGCAAATTTTTAAGATCCCCTTGGCGTTGGAAAGAG
ATTTGGGCGAGCAATCGTCATGTGAAAAACCCACACTGGATTTATCCAGGTGACCGCTTGTTATTGTGTACTTTGGACGG
TCGCCCGCTGATTGGTAAAGATGAAGGCGATGGCTGTGAAGGTGTGATTCGTCGTCATCGTGGTGGGACATCATTGCAAC
CGCAAGTACGTGTCGAGTCACTCAACAACACCATTCCGATCATTCCACTGTCACAAATTGAACAATGGCTGGATCATGGT
CTGATTTTGTCACCCGAGTCGATTCAAAGTACGCCCTATATTTTAGGTTCAGCGGATAATCGTGTGATTACTGGCAAAGG
TCAAACGGTATACGTGCGTGGGAATGGCATCGAGGTTGGACAGAATTACGGCGTGTTCCGCGAGTCTGAACCGTATACCA
TCATCGACCATACCGGCAAACGCCCAGTGAAAGTGGTAAAAGCAGTCGAATTGGTGGAAGTGGCAGCCGGCACTGCGGTT
GCGAGCGAAAATGATGTCACCACCTTAGAACTCACAGATAGCTTTAATGCTGAAGTGCGCAGTGGTGATCATGTCTTGCC
ACGTTATAACCCAGAATTGCCAAGTCTGTTTTTCCCGACCGCAACCAACGATATTGTTGAAGGTGGTCAAATTGTCCGTG
TCATGGGCTCAATTGGTACAGCTGCACAGCGTAGCGTGGTGACGCTCGATCGCGGTGCAGTGCACGGTGCAAAAACTGGG
CATGTGTTAAGTATTTTCCAACAAGGCGAAGTGGTGCGTGACCCGAAAACCAAAGAAGCGATTAAGTTGCCCAATCAACG
TGTTGGTAATTTGATGATCTTCAAAACTTTCGATCAATACAGCTATGCCTATGTACTGGATAGTTCATTGCCGATTAAAG
TCGGTGCATCAGTACAAGCCCCTGCCATCGCAGAAAATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(56-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8S869

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

61.499

100

0.617