Detailed information NTG0428623

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: G8D99_RS01320
• Genome accession: NZ_CP049916
• Coordinates: 283418..284476 (+)
• Length: 352 a.a.
• NCBI ID: WP_166321909.1
• Uniprot ID: A0A6G8S0R4
• Organism: Acinetobacter lanii strain 185
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 278418..289476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8D99_RS01305 (G8D99_01305)	mraY	278627..279745 (+)	1119	WP_166321905.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
G8D99_RS01310 (G8D99_01310)	-	279814..280620 (+)	807	WP_166327430.1	putative RNA methyltransferase	-
G8D99_RS01315 (G8D99_01315)	ponA	280701..283253 (-)	2553	WP_166321907.1	penicillin-binding protein PBP1a	-
G8D99_RS01320 (G8D99_01320)	comM	283418..284476 (+)	1059	WP_166321909.1	pilus assembly protein PilM	Machinery gene
G8D99_RS01325 (G8D99_01325)	pilN	284476..285102 (+)	627	WP_166321911.1	PilN domain-containing protein	Machinery gene
G8D99_RS01330 (G8D99_01330)	comO	285099..285857 (+)	759	WP_166321913.1	type 4a pilus biogenesis protein PilO	Machinery gene
G8D99_RS01335 (G8D99_01335)	pilP	285854..286381 (+)	528	WP_166321915.1	pilus assembly protein PilP	Machinery gene
G8D99_RS01340 (G8D99_01340)	pilQ	286401..288590 (+)	2190	WP_166321917.1	type IV pilus secretin PilQ	Machinery gene
G8D99_RS01345 (G8D99_01345)	aroK	288627..289175 (+)	549	WP_166321919.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39018.63 Da
• Isoelectric Point: 4.4403

>NTDB_id=428623 G8D99_RS01320 WP_166321909.1 283418..284476(+) (comM) [Acinetobacter lanii strain 185]
MLRLYRKPNKGLMGVDISSTSVKILELSVKNGRYWVESYGLSPLVDGSVVEKNILNAENVADALERAMNIANPQSSNAAI
AVPTSMVINKIIEMDADMSDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPEKLANPQRVNVLLVATRTENVDSRVEVLDL
VGLEPKVADVESYALERSFEVFADTLPIGVNLVGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDVQNRYGLSFGE
AGRAKKDRTLPDDYESEVLMPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLQKLMQQKLGYRVTVANPFL
QMGFSPQIDLRKIENDAPSLLVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=428623 G8D99_RS01320 WP_166321909.1 283418..284476(+) (comM) [Acinetobacter lanii strain 185]
GTGCTTAGACTTTATCGTAAGCCAAATAAGGGGTTAATGGGAGTGGATATTAGTTCCACTTCTGTAAAGATTTTAGAACT
CTCTGTTAAAAATGGCCGTTACTGGGTAGAAAGCTATGGGCTAAGTCCATTGGTTGACGGCAGTGTCGTCGAAAAAAATA
TTTTAAATGCTGAAAATGTCGCAGATGCTTTAGAGCGTGCGATGAATATTGCCAATCCACAATCTTCCAATGCAGCGATT
GCTGTACCGACTTCGATGGTGATCAATAAAATCATCGAGATGGACGCTGACATGAGCGATGATGAACGTGAAGTTCAGAT
TCGTATGGATGCAGAGCAATACATTCCATTTCCATTGGATGAAGTGAGTTTGGACTTTGAAGTTCTCCCTGAAAAACTCG
CCAATCCACAACGGGTTAATGTGCTCTTGGTGGCAACACGTACTGAAAATGTCGATTCTCGTGTCGAGGTTTTGGATCTG
GTTGGACTGGAGCCGAAAGTGGCGGATGTCGAAAGTTATGCACTCGAGCGTAGTTTTGAGGTGTTTGCAGATACTTTACC
GATTGGCGTGAACTTGGTTGGTATTTTAGATATTGGTCACACCATGACCACTTTATCTGTGATGCAAAACGGCAAGATTA
TTTATACCCGTGAACAGGTCTTCGGCGGCAAACAATTGACTCAAGACGTGCAAAATCGTTATGGACTGTCTTTTGGGGAA
GCAGGGCGTGCCAAGAAAGATCGCACGCTACCTGATGATTATGAATCAGAAGTTTTAATGCCATTTTTAGATGCGGTGGT
ACAGCAAGCTGCGCGTTCATTGCAGTTCTTCTTTTCTTCTTCTCAGTTTAATGAGATTGATCATATTTTATTGGCGGGTG
GTAATGCCAATATTCCTGGTCTACAAAAACTCATGCAACAAAAATTAGGCTATCGTGTCACTGTTGCCAACCCATTTCTA
CAAATGGGTTTTTCTCCTCAAATCGATCTTAGAAAAATAGAAAATGATGCGCCATCTTTGTTGGTGGCGTGCGGATTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A6G8S0R4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	80.114	100	0.801
pilM	Legionella pneumophila strain ERS1305867	43.38	100	0.437