Detailed information NTG0428528

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V753_RS16440
• Genome accession: NZ_CP049904
• Coordinates: 3350094..3351257 (-)
• Length: 387 a.a.
• NCBI ID: WP_007614106.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GB03
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3345094..3356257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V753_RS16410 (V753_16380)	-	3345358..3345777 (-)	420	WP_007614102.1	TIGR03826 family flagellar region protein	-
V753_RS16415 (V753_16385)	comFC	3345851..3346540 (-)	690	WP_200866785.1	phosphoribosyltransferase family protein	Machinery gene
V753_RS16420 (V753_16390)	-	3346546..3346830 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
V753_RS16425 (V753_16395)	comFA	3346888..3348273 (-)	1386	WP_007614104.1	DEAD/DEAH box helicase	Machinery gene
V753_RS16430 (V753_16400)	-	3348382..3349230 (-)	849	WP_007614105.1	DegV family protein	-
V753_RS16435 (V753_16405)	degU	3349328..3350017 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V753_RS16440 (V753_16410)	degS	3350094..3351257 (-)	1164	WP_007614106.1	two-component sensor histidine kinase DegS	Regulator
V753_RS16445 (V753_16415)	-	3351480..3352127 (+)	648	WP_007614107.1	YigZ family protein	-
V753_RS16450 (V753_16420)	-	3352132..3353313 (+)	1182	WP_007614108.1	LCP family protein	-
V753_RS16455 (V753_16425)	-	3353416..3354492 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
V753_RS16460 (V753_16430)	tuaH	3354625..3355821 (-)	1197	WP_007614112.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.81 Da
• Isoelectric Point: 6.8616

>NTDB_id=428528 V753_RS16440 WP_007614106.1 3350094..3351257(-) (degS) [Bacillus velezensis strain GB03]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEI
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=428528 V753_RS16440 WP_007614106.1 3350094..3351257(-) (degS) [Bacillus velezensis strain GB03]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATACATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
TAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAATA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.844	99.483	0.953