Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G7Y90_RS00905 Genome accession   NZ_CP049902
Coordinates   173198..173575 (-) Length   125 a.a.
NCBI ID   WP_045453505.1    Uniprot ID   -
Organism   Psychrobacter sp. WY6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 168198..178575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7Y90_RS00885 - 169345..170319 (-) 975 WP_250163151.1 CheR family methyltransferase -
  G7Y90_RS00890 - 170432..171658 (-) 1227 Protein_177 methyl-accepting chemotaxis protein -
  G7Y90_RS00895 - 172021..172551 (-) 531 WP_055124771.1 chemotaxis protein CheW -
  G7Y90_RS00900 - 172555..172917 (-) 363 WP_045444033.1 response regulator -
  G7Y90_RS00905 pilG 173198..173575 (-) 378 WP_045453505.1 twitching motility response regulator PilG Regulator
  G7Y90_RS17595 - 173838..173972 (+) 135 WP_284143798.1 hypothetical protein -
  G7Y90_RS00910 - 174276..175679 (+) 1404 WP_250163152.1 HlyD family efflux transporter periplasmic adaptor subunit -
  G7Y90_RS00915 - 175862..176584 (+) 723 WP_045444030.1 response regulator transcription factor -
  G7Y90_RS00920 - 176687..177190 (+) 504 WP_250163153.1 hypothetical protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14027.10 Da        Isoelectric Point: 4.5807

>NTDB_id=428451 G7Y90_RS00905 WP_045453505.1 173198..173575(-) (pilG) [Psychrobacter sp. WY6]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
SKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=428451 G7Y90_RS00905 WP_045453505.1 173198..173575(-) (pilG) [Psychrobacter sp. WY6]
ATGGAAAATAATTTTGATGGTTTAAAAGTAATGGTAATTGATGATTCAAAAACCATTCGCCGTACCGCAGAGACTTTATT
ACAAAAAGCGGGTTGCGAAGTTGTGACCGCCATTGATGGTTTTGATGCTTTAGCAAAAATTGTCGATAACAATCCAGATA
TTATTTTTGTCGACATCATGATGCCGCGTTTGGATGGCTATCAGACTTGTGCGCTAATAAAAAATAACCCTGATTATGCC
AGCAAACCTGTGATTATGTTGTCGTCTAAAGATGGCTTATTTGACAAAGCGCGTGGTCGTATCGTGGGTTCAGATGAGTA
TCTGACCAAGCCATTTAGTAAAGATGAGCTGTTCGAGGCAATTAATCAGTACCGCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.419

99.2

0.768
  vicR Streptococcus mutans UA159

40.517

92.8

0.376
  micA Streptococcus pneumoniae Cp1015

42.202

87.2

0.368
  pilH Synechocystis sp. PCC 6803

40.351

91.2

0.368