Detailed information NTG0042835

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: MYY_RS09950
• Genome accession: NC_017769
• Coordinates: 1882092..1882991 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904848.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae ST556
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1877092..1887991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYY_RS09935 (MYY_1906)	rsmA	1877742..1878614 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
MYY_RS13430	-	1878865..1879158 (-)	294	Protein_1901	hypothetical protein	-
MYY_RS09940 (MYY_1909)	-	1879151..1879792 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
MYY_RS09945 (MYY_1910)	-	1879794..1881824 (-)	2031	WP_000825271.1	bacteriocin-associated integral membrane family protein	-
MYY_RS09950 (MYY_1911)	comR	1882092..1882991 (-)	900	WP_000904848.1	helix-turn-helix transcriptional regulator	Regulator
MYY_RS09955 (MYY_1912)	rnmV	1883063..1883623 (-)	561	WP_000660013.1	ribonuclease M5	-
MYY_RS09960 (MYY_1913)	-	1883623..1884396 (-)	774	WP_000575650.1	TatD family hydrolase	-
MYY_RS09965 (MYY_1914)	-	1884701..1885672 (-)	972	Protein_1907	DUF1542 domain-containing protein	-
MYY_RS09970 (MYY_1915)	rpmH	1885878..1886012 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
MYY_RS09975 (MYY_1916)	-	1886157..1887371 (-)	1215	WP_000666484.1	pyridoxal phosphate-dependent aminotransferase	-
MYY_RS09980 (MYY_03435)	-	1887527..1887819 (-)	293	Protein_1910	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35420.14 Da
• Isoelectric Point: 4.6674

>NTDB_id=42835 MYY_RS09950 WP_000904848.1 1882092..1882991(-) (comR) [Streptococcus pneumoniae ST556]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEELMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=42835 MYY_RS09950 WP_000904848.1 1882092..1882991(-) (comR) [Streptococcus pneumoniae ST556]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATATCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAGAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus pyogenes MGAS315	36	100	0.361
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361