Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilW   Type   Machinery gene
Locus tag   G8E09_RS01730 Genome accession   NZ_CP049806
Coordinates   367288..368289 (+) Length   333 a.a.
NCBI ID   WP_167562968.1    Uniprot ID   A0A6H0FQB7
Organism   Acinetobacter pittii strain A1254     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 362288..373289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E09_RS01700 (G8E09_01700) - 363844..363999 (-) 156 Protein_327 hypothetical protein -
  G8E09_RS01705 (G8E09_01705) rpoZ 364038..364316 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  G8E09_RS01710 (G8E09_01710) gmk 364389..365018 (-) 630 WP_167562965.1 guanylate kinase -
  G8E09_RS01715 (G8E09_01715) ispH 365141..366091 (+) 951 WP_032036628.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  G8E09_RS01720 (G8E09_01720) fimU 366261..366734 (+) 474 WP_167562966.1 pilus assembly FimT family protein Machinery gene
  G8E09_RS01725 (G8E09_01725) pilV 366728..367288 (+) 561 WP_167562967.1 type IV pilus modification protein PilV Machinery gene
  G8E09_RS01730 (G8E09_01730) pilW 367288..368289 (+) 1002 WP_167562968.1 PilW family protein Machinery gene
  G8E09_RS01735 (G8E09_01735) pilX 368286..369095 (+) 810 WP_167562969.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  G8E09_RS01740 (G8E09_01740) pilY1 369107..372952 (+) 3846 WP_214286939.1 PilC/PilY family type IV pilus protein Machinery gene

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 35774.38 Da        Isoelectric Point: 6.6395

>NTDB_id=427972 G8E09_RS01730 WP_167562968.1 367288..368289(+) (pilW) [Acinetobacter pittii strain A1254]
MAHSFVSWKQRGFTLIELMVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGLEYIARDIRLLNYGNVTNPIL
TDTTPWGGVVLTGSTATNNNNVNFVPNVGTNTYIADTLLSRGAGDTVSTVSNHWKGLSNIQNSSNAAVQSDQLTIQFIAP
TNMTNCEGVNVLAGDLIVERYFLRLDSNGSSQQDYALACDANTPSAVATAQPTTVAGLGDAGQIVLPRIDHFHVLFGTKN
AAGNFAYYTIPQYRAAAQAARDATPSVMPPRILSIQISVLARSTNNAQSKAIDPEQSFFMLDQTVHASDNTTRFLRRTYN
LTIALRNAMGESL

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=427972 G8E09_RS01730 WP_167562968.1 367288..368289(+) (pilW) [Acinetobacter pittii strain A1254]
ATGGCTCACTCATTTGTATCGTGGAAACAACGAGGCTTTACATTAATTGAGCTGATGGTTGCATTGGCTTTAGGTCTAAT
TTTGGTAGCCGCGGCGACTCAATTATTTATTGGTGGACTTCTATCAAGCCGTCTACAAAAAGCAAATGCCGAAATACAAG
ATAGCGGTATTTTTGGTTTGGAATATATTGCCCGTGATATACGGCTTCTAAATTATGGAAATGTAACCAACCCAATATTA
ACTGATACAACCCCTTGGGGCGGTGTTGTATTAACTGGCTCAACTGCAACCAATAACAACAATGTTAATTTTGTCCCTAA
CGTTGGAACAAATACTTATATTGCTGACACATTACTCAGTCGTGGTGCAGGGGATACGGTGAGTACTGTGAGTAATCACT
GGAAAGGTCTTTCAAATATACAGAACAGTTCAAATGCTGCTGTGCAAAGTGATCAGCTGACTATCCAATTTATTGCACCT
ACGAATATGACCAATTGTGAAGGTGTAAATGTACTTGCAGGTGATTTAATTGTAGAGCGTTATTTTTTACGTCTGGATAG
CAATGGTAGTTCCCAGCAAGATTATGCACTTGCATGTGATGCAAATACTCCCTCTGCTGTAGCCACAGCTCAACCGACCA
CTGTTGCTGGGTTGGGCGACGCTGGTCAAATTGTATTGCCGCGTATTGATCATTTCCATGTGCTGTTTGGTACAAAAAAT
GCGGCTGGCAATTTTGCTTATTATACCATTCCCCAATATCGCGCTGCTGCACAGGCTGCCCGAGATGCTACACCATCTGT
GATGCCGCCACGAATTCTTTCAATACAAATATCTGTATTAGCGCGCTCTACTAATAATGCCCAAAGCAAAGCAATAGATC
CTGAGCAATCTTTTTTTATGTTAGATCAAACCGTGCATGCTTCTGATAATACAACTCGATTCTTACGCCGCACTTATAAC
TTAACAATTGCTCTACGCAACGCGATGGGGGAAAGTCTATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(9-32)

Type IV Pilus-assembly protein W (PilW)

(181-327)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0FQB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilW Acinetobacter baumannii D1279779

85.586

100

0.856