Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   G8E09_RS01735 Genome accession   NZ_CP049806
Coordinates   368286..369095 (+) Length   269 a.a.
NCBI ID   WP_167562969.1    Uniprot ID   A0A6H0FQD9
Organism   Acinetobacter pittii strain A1254     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 363286..374095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E09_RS01700 (G8E09_01700) - 363844..363999 (-) 156 Protein_327 hypothetical protein -
  G8E09_RS01705 (G8E09_01705) rpoZ 364038..364316 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  G8E09_RS01710 (G8E09_01710) gmk 364389..365018 (-) 630 WP_167562965.1 guanylate kinase -
  G8E09_RS01715 (G8E09_01715) ispH 365141..366091 (+) 951 WP_032036628.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  G8E09_RS01720 (G8E09_01720) fimU 366261..366734 (+) 474 WP_167562966.1 pilus assembly FimT family protein Machinery gene
  G8E09_RS01725 (G8E09_01725) pilV 366728..367288 (+) 561 WP_167562967.1 type IV pilus modification protein PilV Machinery gene
  G8E09_RS01730 (G8E09_01730) pilW 367288..368289 (+) 1002 WP_167562968.1 PilW family protein Machinery gene
  G8E09_RS01735 (G8E09_01735) pilX 368286..369095 (+) 810 WP_167562969.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  G8E09_RS01740 (G8E09_01740) pilY1 369107..372952 (+) 3846 WP_214286939.1 PilC/PilY family type IV pilus protein Machinery gene
  G8E09_RS01745 (G8E09_01745) pilY2 372963..373445 (+) 483 WP_167562970.1 type IV pilin protein Machinery gene
  G8E09_RS01750 (G8E09_01750) pilE 373442..373867 (+) 426 WP_086265003.1 type IV pilin protein Machinery gene

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 28601.44 Da        Isoelectric Point: 7.2646

>NTDB_id=427973 G8E09_RS01735 WP_167562969.1 368286..369095(+) (pilX) [Acinetobacter pittii strain A1254]
MTHLIHKSRSKEKGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVSQLNFQSSDTPLELIVQMNPTTLTNITNVI
GAALKEHESNPGAEYNFCYKPVSTATNFAQTRGASLLRAGSANNAVVEDGGVAGFCNLTTDYGSNRQAVVTQVAVSVPTD
AAIDIPGSNLPRGTNTSEGTQLPKSMLSTQRIRVITTAFLPAYASTSIETLQRDCLSTSSAKISDNFDSELTAKQTLAEC
LANHNVPFSTQVQEFNYTNKLTQITAPGS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=427973 G8E09_RS01735 WP_167562969.1 368286..369095(+) (pilX) [Acinetobacter pittii strain A1254]
ATGACCCATTTAATTCATAAAAGTCGATCTAAAGAAAAAGGGGCAACCCTTATTGTTGTACTTATTATTTTATTAATTGT
TATTTCTGTAGGTGTTTTAGCAATAAGAGTGGCTATTGTTTCTTTAAAAGTTGCTACCAATAGCCAAGTTAGCCAATTAA
ATTTTCAGTCATCTGACACACCTTTAGAACTCATTGTGCAGATGAATCCTACCACCCTAACTAATATTACCAATGTGATT
GGCGCCGCGCTCAAAGAGCATGAAAGTAACCCAGGCGCAGAATACAACTTTTGTTATAAGCCTGTTTCTACAGCAACAAA
TTTTGCTCAAACCAGAGGTGCAAGTTTACTTCGAGCAGGAAGTGCCAATAATGCGGTTGTCGAAGATGGCGGAGTGGCGG
GTTTCTGCAATTTAACAACTGACTATGGAAGTAATCGTCAAGCAGTGGTTACCCAAGTTGCTGTAAGTGTTCCAACAGAT
GCTGCTATCGATATCCCAGGTTCAAATTTACCACGAGGAACAAACACCTCGGAAGGCACGCAACTTCCTAAAAGCATGTT
GTCTACGCAACGTATTCGAGTGATCACAACTGCGTTTTTGCCAGCCTATGCTTCTACCTCTATTGAAACTTTACAAAGAG
ATTGCTTAAGCACGAGTTCGGCAAAAATTAGTGACAATTTTGATAGCGAATTAACGGCTAAACAAACATTGGCGGAATGT
TTGGCAAATCATAACGTGCCTTTTAGTACTCAAGTTCAAGAATTTAACTATACCAATAAACTCACTCAAATTACGGCACC
AGGTTCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0FQD9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Acinetobacter baumannii D1279779

89.706

100

0.907