Detailed information NTG0042618

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: GYO_RS40100
• Genome accession: NC_016047
• Coordinates: 3604688..3605845 (-)
• Length: 385 a.a.
• NCBI ID: WP_014115355.1
• Uniprot ID: -
• Organism: Bacillus spizizenii TU-B-10
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3599688..3610845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GYO_RS40070 (GYO_3888)	-	3599938..3600357 (-)	420	WP_014115350.1	TIGR03826 family flagellar region protein	-
GYO_RS40075 (GYO_3889)	comFC	3600430..3601152 (-)	723	WP_014115351.1	ComF family protein	Machinery gene
GYO_RS40080 (GYO_3890)	-	3601116..3601412 (-)	297	WP_014115352.1	late competence development ComFB family protein	-
GYO_RS40085 (GYO_3891)	comFA	3601481..3602863 (-)	1383	WP_080010142.1	ATP-dependent helicase ComFA	Machinery gene
GYO_RS40090 (GYO_3892)	-	3602971..3603816 (-)	846	WP_014115354.1	DegV family protein	-
GYO_RS40095 (GYO_3893)	degU	3603916..3604605 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
GYO_RS40100 (GYO_3894)	degS	3604688..3605845 (-)	1158	WP_014115355.1	two-component sensor histidine kinase DegS	Regulator
GYO_RS40105 (GYO_3895)	-	3606061..3606714 (+)	654	WP_014115356.1	YigZ family protein	-
GYO_RS40110 (GYO_3896)	-	3606714..3607706 (+)	993	WP_041521082.1	LCP family protein	-
GYO_RS40115 (GYO_3897)	-	3608449..3608898 (+)	450	WP_238528883.1	hypothetical protein	-
GYO_RS40120 (GYO_3898)	-	3608951..3609406 (+)	456	WP_014115359.1	hypothetical protein	-
GYO_RS40125 (GYO_3899)	-	3609457..3609909 (+)	453	WP_014115360.1	hypothetical protein	-
GYO_RS40130 (GYO_3900)	-	3609984..3610763 (+)	780	WP_014115361.1	membrane-spanning protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44987.78 Da
• Isoelectric Point: 6.2957

>NTDB_id=42618 GYO_RS40100 WP_014115355.1 3604688..3605845(-) (degS) [Bacillus spizizenii TU-B-10]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=42618 GYO_RS40100 WP_014115355.1 3604688..3605845(-) (degS) [Bacillus spizizenii TU-B-10]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTTATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGGTTCAGTGAAGAAGAAATCCGCAATGCTTACGAAAAAGCCCATAAACTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAACTGCGGGAACGCCGGGATGATTTAGAGCGAAGATTGTTAGGCCTTCAGGAAATCATTGAGC
GGTCTGAATCATTAGTAAGCCAAATAACAGTTGTGCTTAACTACTTGAATCAGGATTTGCGCGAGGTCGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCACAGGAAGAAGAGCGAAAAAGAGTCTCCAGAGA
AATTCATGACGGACCTGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTACTGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGTGAAACAGAGGATCAGCGGCTTGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGAAAAGGGTTCGACTTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATCTATTGGAAGGAACCATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.74	100	0.997