Detailed information NTG0424659

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: G5C67_RS10490
• Genome accession: NZ_CP049089
• Coordinates: 2142557..2143684 (+)
• Length: 375 a.a.
• NCBI ID: WP_164692183.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain vHPS7
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2137557..2148684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5C67_RS10465 (G5C67_10430)	-	2138638..2138913 (+)	276	WP_075630739.1	type II toxin-antitoxin system RelE family toxin	-
G5C67_RS10470 (G5C67_10435)	-	2138952..2139332 (+)	381	WP_075630738.1	helix-turn-helix domain-containing protein	-
G5C67_RS10475 (G5C67_10440)	-	2139978..2140919 (-)	942	WP_164692181.1	hypothetical protein	-
G5C67_RS10480 (G5C67_10445)	rfaD	2141011..2141937 (-)	927	WP_164692182.1	ADP-glyceromanno-heptose 6-epimerase	-
G5C67_RS10485 (G5C67_10450)	def	2141949..2142461 (-)	513	WP_005712670.1	peptide deformylase	-
G5C67_RS10490 (G5C67_10455)	dprA	2142557..2143684 (+)	1128	WP_164692183.1	DNA-processing protein DprA	Machinery gene
G5C67_RS10495 (G5C67_10460)	-	2143737..2144573 (+)	837	WP_010787337.1	heme/hemin ABC transporter substrate-binding protein	-
G5C67_RS10500 (G5C67_10465)	-	2144573..2145559 (+)	987	WP_164692184.1	FecCD family ABC transporter permease	-
G5C67_RS10505 (G5C67_10470)	-	2145559..2146347 (+)	789	WP_075605108.1	heme ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41809.89 Da
• Isoelectric Point: 6.0004

>NTDB_id=424659 G5C67_RS10490 WP_164692183.1 2142557..2143684(+) (dprA) [Glaesserella parasuis strain vHPS7]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVDTSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNSVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSDPKFAKNLPKL
TACQQQLFEQISLEPISVDDLAKATDMAVETALIELLNLELLGVVKQVRGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=424659 G5C67_RS10490 WP_164692183.1 2142557..2143684(+) (dprA) [Glaesserella parasuis strain vHPS7]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCGCAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCATTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACCTTATTT
GACGAAGATTATCCTTTTTTATTGAAGCAGATCAGCACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCTATCGTCGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAGCTTGCTGTCACCAGTGGCTTAGCCATAGGCATAGATGGATTTTGCCATCAACGTGCGGTCAAT
GAGAATGGAATTACCATTGCGGTTCTAGGCAGTGGGCTAGACCAAGTCTATCCTGCTCGCCACAAAAAACTTGCGGAACA
AATCGTTGATACAAGCGGTGCATTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAAAATTTCCCTAGACGAA
ATCGCATCATCAGCGGATTATCTCTCGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGTTCGCTCATCACTGCCCGT
TATGCGTTAGAGCAAGGACGAGAAGTTTTTGCATTGCCAAACTCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGACCCCAAATTTGCAAAAAATCTACCTAAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCGTTGATGATCTTGCCAAAGCAACAGATAT
GGCGGTAGAAACCGCATTAATTGAGCTGTTAAATTTGGAGTTGTTGGGTGTTGTGAAGCAGGTGAGAGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	98.133	100	0.981
dprA	Haemophilus influenzae Rd KW20	53.235	90.667	0.483
dprA	Vibrio campbellii strain DS40M4	46.917	99.467	0.467
dprA	Vibrio cholerae strain A1552	43.883	100	0.44
dprA	Legionella pneumophila strain ERS1305867	38.889	100	0.392