Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BCOA_RS19645 Genome accession   NC_016023
Coordinates   492598..493548 (-) Length   316 a.a.
NCBI ID   WP_014095860.1    Uniprot ID   G2TQ58
Organism   Heyndrickxia coagulans 36D1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 487598..498548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCOA_RS19615 (Bcoa_0477) - 488245..488937 (-) 693 WP_013858648.1 response regulator transcription factor -
  BCOA_RS19620 (Bcoa_0478) - 489048..489350 (-) 303 WP_014095855.1 DUF5316 domain-containing protein -
  BCOA_RS19625 (Bcoa_0479) - 489657..489893 (+) 237 WP_026104642.1 4Fe-4S binding protein -
  BCOA_RS19630 (Bcoa_0480) - 489950..490888 (-) 939 WP_041817877.1 siderophore ABC transporter substrate-binding protein -
  BCOA_RS19635 (Bcoa_0481) - 490903..491661 (-) 759 WP_014095858.1 ABC transporter ATP-binding protein -
  BCOA_RS19640 (Bcoa_0482) - 491655..492605 (-) 951 WP_014095859.1 iron chelate uptake ABC transporter family permease subunit -
  BCOA_RS19645 (Bcoa_0483) ceuB 492598..493548 (-) 951 WP_014095860.1 ABC transporter permease Machinery gene
  BCOA_RS19650 (Bcoa_0484) - 493861..495057 (-) 1197 WP_225621021.1 PDZ domain-containing protein -
  BCOA_RS19655 (Bcoa_0485) - 496255..497691 (-) 1437 WP_014095862.1 S41 family peptidase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34436.57 Da        Isoelectric Point: 10.0424

>NTDB_id=42463 BCOA_RS19645 WP_014095860.1 492598..493548(-) (ceuB) [Heyndrickxia coagulans 36D1]
MKKRYLVPLLAVLSIISIFIGAENIRPADMLHLSREQTEILLASRLPRLISIIIAGMGMSICGLVMQQLTRNKFVSPTTA
GTMDCARLGILVAIILFSAASPLIKIAVAFCFALAGTLLFMKILGRIKWNDTIFIPLVGLMFGNIVSSVSTFFAYKFDLI
QSLSSWLQGDFSGVLKGKYEMLYLAVPAVLVAYVFANRFTVAGMGEDFAKNLGLNYKQVVNIGLVLVALITSATVLTVGT
IPFLGLIIPNIVSIYRGDHMKKSITVTALLGAVFLLFCDILGRLVIYPYEVPISLTAGIIGSGIFVYLLLRRHAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=42463 BCOA_RS19645 WP_014095860.1 492598..493548(-) (ceuB) [Heyndrickxia coagulans 36D1]
ATGAAAAAAAGATATTTAGTGCCCCTGCTTGCCGTCCTGTCCATCATTTCAATTTTCATCGGCGCAGAAAATATCAGACC
GGCGGATATGCTCCATTTAAGCAGGGAGCAGACGGAAATTTTGCTGGCAAGCCGCCTGCCGCGTCTGATCAGCATCATCA
TTGCAGGCATGGGCATGAGCATCTGCGGCCTTGTGATGCAGCAGTTGACGAGAAATAAATTTGTCTCCCCGACGACAGCC
GGCACGATGGACTGTGCCCGGCTCGGCATTTTAGTTGCGATCATCCTGTTTTCGGCGGCAAGCCCGCTGATCAAAATTGC
GGTTGCTTTTTGCTTTGCTCTGGCTGGCACCTTGCTGTTCATGAAAATACTGGGCCGGATTAAATGGAACGATACGATTT
TCATCCCGCTTGTCGGGCTGATGTTTGGCAATATCGTAAGCTCTGTATCGACTTTCTTTGCGTATAAATTCGATTTAATC
CAGAGCCTGTCCTCATGGCTGCAAGGCGATTTTTCAGGCGTGCTGAAAGGAAAGTACGAGATGCTTTATTTAGCAGTTCC
CGCCGTTTTGGTCGCGTATGTGTTCGCAAACCGGTTTACGGTCGCCGGCATGGGGGAAGATTTTGCCAAAAACCTTGGCC
TGAATTATAAGCAGGTGGTCAATATCGGCCTTGTCCTTGTCGCGCTGATTACTTCGGCAACGGTACTGACAGTCGGCACC
ATCCCGTTTCTGGGCTTAATTATTCCAAACATTGTGTCCATTTACCGCGGCGACCATATGAAAAAAAGCATTACGGTGAC
GGCGCTGCTTGGGGCAGTGTTCCTGCTATTTTGCGATATTTTGGGGCGCCTTGTCATTTATCCATATGAAGTGCCGATCA
GTTTAACAGCCGGCATCATCGGGAGTGGCATTTTTGTATATTTGCTGCTGAGGAGACACGCTTATGCATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G2TQ58

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.077

99.051

0.516

Multiple sequence alignment