Detailed information NTG0423535

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: IE382_RS17170
• Genome accession: NZ_CP061870
• Coordinates: 3141605..3142210 (-)
• Length: 201 a.a.
• NCBI ID: WP_144458755.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FX-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3136605..3147210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IE382_RS17140 (IE382_17055)	-	3137262..3137651 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
IE382_RS17145 (IE382_17060)	yajC	3137863..3138129 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
IE382_RS17150 (IE382_17065)	tgt	3138167..3139312 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
IE382_RS17155 (IE382_17070)	queA	3139339..3140367 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
IE382_RS17160 (IE382_17075)	yrzS	3140397..3140597 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
IE382_RS17165 (IE382_17080)	ruvB	3140590..3141594 (-)	1005	WP_017696349.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
IE382_RS17170 (IE382_17085)	ruvA	3141605..3142210 (-)	606	WP_144458755.1	Holliday junction branch migration protein RuvA	Machinery gene
IE382_RS17175 (IE382_17090)	bofC	3142349..3142861 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
IE382_RS17180 (IE382_17095)	csbX	3142909..3144216 (-)	1308	WP_003246197.1	MFS transporter	-
IE382_RS17185 (IE382_17100)	iolG	3144287..3145312 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
IE382_RS17190 (IE382_17105)	yrzF	3145550..3146197 (+)	648	WP_003246159.1	phosphotransferase	-
IE382_RS17195 (IE382_17110)	-	3146243..3146365 (-)	123	WP_003229707.1	hypothetical protein	-
IE382_RS17200	-	3146450..3146524 (+)	75	Protein_3351	hypothetical protein	-
IE382_RS17205 (IE382_17115)	-	3146528..3146896 (+)	369	WP_257724450.1	DUF5412 domain-containing protein	-
IE382_RS17210 (IE382_17120)	-	3146903..3147043 (+)	141	WP_017696343.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22556.07 Da
• Isoelectric Point: 5.7447

>NTDB_id=423535 IE382_RS17170 WP_144458755.1 3141605..3142210(-) (ruvA) [Bacillus subtilis strain FX-1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSKETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADAVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=423535 IE382_RS17170 WP_144458755.1 3141605..3142210(-) (ruvA) [Bacillus subtilis strain FX-1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCAAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGGCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCGGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGCTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTCGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	99.005	100	0.99
ruvA	Streptococcus pneumoniae R6	38.835	100	0.398
ruvA	Streptococcus pneumoniae D39	38.835	100	0.398
ruvA	Streptococcus pneumoniae TIGR4	38.835	100	0.398