Detailed information    

insolico Bioinformatically predicted

Overview


Name   rapC   Type   Regulator
Locus tag   G4P54_RS02075 Genome accession   NZ_CP048852
Coordinates   405084..406232 (+) Length   382 a.a.
NCBI ID   WP_167871626.1    Uniprot ID   A0A6H0WFF8
Organism   Bacillus tequilensis strain EA-CB0015     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 400084..411232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS02050 (G4P54_02045) - 400087..400308 (-) 222 WP_024714538.1 hypothetical protein -
  G4P54_RS02055 (G4P54_02050) gerKA 400434..402068 (+) 1635 WP_167871624.1 spore germination protein GerKA -
  G4P54_RS02060 (G4P54_02055) - 402058..403281 (+) 1224 WP_167871625.1 Ger(x)C family spore germination protein -
  G4P54_RS02065 (G4P54_02060) - 403306..404430 (+) 1125 WP_024714535.1 GerAB/ArcD/ProY family transporter -
  G4P54_RS21590 - 404479..404630 (-) 152 Protein_364 ABC transporter permease -
  G4P54_RS02070 (G4P54_02065) - 404787..404921 (+) 135 Protein_365 ATP-binding protein -
  G4P54_RS02075 (G4P54_02070) rapC 405084..406232 (+) 1149 WP_167871626.1 response regulator aspartate phosphatase RapC Regulator
  G4P54_RS02080 (G4P54_02075) phrC 406216..406338 (+) 123 WP_024714533.1 phosphatase RapC inhibitor PhrC Regulator
  G4P54_RS02085 (G4P54_02080) - 406439..406528 (-) 90 WP_167871627.1 YjcZ family sporulation protein -
  G4P54_RS02090 (G4P54_02085) - 406711..408075 (-) 1365 WP_167871628.1 aspartate kinase -
  G4P54_RS02095 (G4P54_02090) ceuB 408461..409411 (+) 951 WP_024714530.1 petrobactin ABC transporter permease YclN Machinery gene
  G4P54_RS02100 (G4P54_02095) yclO 409404..410351 (+) 948 WP_167871629.1 petrobactin ABC transporter permease YclO -
  G4P54_RS02105 (G4P54_02100) yclP 410345..411103 (+) 759 WP_167871630.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 45714.77 Da        Isoelectric Point: 5.0480

>NTDB_id=423534 G4P54_RS02075 WP_167871626.1 405084..406232(+) (rapC) [Bacillus tequilensis strain EA-CB0015]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYIEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALDMAQAEQKAQLVGRAYYNLGLCYYNQDLLN
PAIDYFEKAVSTFERSRIINSLPQAYFLITLIYYKQGKRDKGSEYHKRGYEYAKETDDADYAVKFEFLHSLYQEQPDEEG
IEQCFQYLKNKNMYADIEDLALEVAKYYYEQNWFKLSASYFLKVEEARKQIQRSEGLYEVEI

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=423534 G4P54_RS02075 WP_167871626.1 405084..406232(+) (rapC) [Bacillus tequilensis strain EA-CB0015]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCACGATTCCAACTTGCTGCTCTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTAGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCCGAATTATCCAGAAACATCGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCAGCCATTACCTATTATAAACAGGCGGAGAAAAAGCTTTCCT
TCGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACCTATTTT
TCGTTGATTCATATAAAAAACGCCTATGAAATATATATAGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCGATATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGATCTGCTGAAC
CCTGCCATTGATTACTTTGAAAAAGCGGTTTCCACGTTTGAACGCAGCAGGATCATCAATTCTCTGCCGCAAGCATATTT
TTTAATCACCTTGATTTATTATAAACAGGGAAAACGTGATAAAGGTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGATGATGCAGACTATGCGGTAAAATTCGAGTTTTTGCACTCCCTATATCAGGAACAGCCCGATGAAGAAGGA
ATCGAACAATGTTTCCAATACCTTAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAAAATTGGTTCAAACTGTCTGCTTCCTACTTTCTAAAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAGTTGAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6H0WFF8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

95.55

100

0.956

  rapF Bacillus subtilis subsp. subtilis str. 168

56.842

99.476

0.565