Detailed information NTG0423404

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: G4G71_RS15220
• Genome accession: NZ_CP048833
• Coordinates: 3334638..3335867 (+)
• Length: 409 a.a.
• NCBI ID: WP_169938849.1
• Uniprot ID: -
• Organism: Pseudomonas multiresinivorans strain populi
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3329638..3340867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4G71_RS15190 (G4G71_15155)	-	3329913..3330194 (+)	282	WP_169938837.1	hypothetical protein	-
G4G71_RS15195 (G4G71_15160)	-	3330264..3331541 (-)	1278	WP_169938839.1	OprD family porin	-
G4G71_RS15200 (G4G71_15165)	-	3331824..3333005 (-)	1182	WP_169938841.1	MFS transporter	-
G4G71_RS15205 (G4G71_15170)	-	3333244..3333798 (-)	555	WP_169938843.1	putative glycolipid-binding domain-containing protein	-
G4G71_RS15210 (G4G71_15175)	-	3333798..3334160 (-)	363	WP_169938845.1	MmcQ/YjbR family DNA-binding protein	-
G4G71_RS15215 (G4G71_15180)	-	3334173..3334451 (-)	279	WP_169938847.1	peptidylprolyl isomerase	-
G4G71_RS15220 (G4G71_15185)	pilU	3334638..3335867 (+)	1230	WP_169938849.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
G4G71_RS15225 (G4G71_15190)	-	3336044..3337294 (-)	1251	WP_169938851.1	OprD family porin	-
G4G71_RS15230 (G4G71_15195)	-	3337824..3338708 (+)	885	WP_169938853.1	DMT family transporter	-
G4G71_RS15235 (G4G71_15200)	-	3338750..3339568 (-)	819	WP_169938855.1	XRE family transcriptional regulator	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 44647.00 Da
• Isoelectric Point: 6.1288

>NTDB_id=423404 G4G71_RS15220 WP_169938849.1 3334638..3335867(+) (pilU) [Pseudomonas multiresinivorans strain populi]
MDIQAMLKILATQDGSDLYLSTGAPPCAKFNGVLKPLSSEPMKAGDVARIGYGLMDEEQRAEFDRELEMNLAISVPGVGR
FRINLFKQRNEVSIVARNIKLDIPLFDDLKLPEVLLKVVMEKRGLVLFVGGTGSGKSTSLAALIDHRNRNSGGHIITIED
PIEYVHRHRKSIINQREVGVDTRSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDRI
INFFPEERRPQLLNDLGNNLKAFVSQRLVRTQDGKRRAAVEVLLGTATISDIIKRGDFSSIKEIMDKSRALGMQTFDQAL
FDLAVEGAITEEEAVKNADSANNLRLKLKLYKDNPGSVGSTATPAAAKPAAPAPVAPPPATQPVEASSWGLELALEEIEA
EDAEKPGGQ

Nucleotide

• Length: 1230 bp

>NTDB_id=423404 G4G71_RS15220 WP_169938849.1 3334638..3335867(+) (pilU) [Pseudomonas multiresinivorans strain populi]
ATGGATATCCAAGCGATGCTCAAGATCCTGGCCACCCAGGATGGTTCGGATCTTTACCTCTCCACCGGCGCGCCGCCCTG
CGCCAAGTTCAACGGGGTGCTCAAGCCCCTGTCCAGCGAGCCGATGAAGGCCGGCGACGTCGCCCGCATCGGCTATGGGC
TGATGGACGAGGAGCAGCGCGCGGAGTTCGACCGAGAGCTGGAGATGAACCTGGCGATTTCCGTGCCCGGCGTAGGCCGC
TTCCGGATCAACCTGTTCAAGCAGCGCAACGAAGTGTCGATCGTGGCGCGCAATATCAAGCTGGATATCCCGCTGTTCGA
CGACCTGAAGCTGCCCGAAGTGCTGCTCAAGGTGGTCATGGAGAAGCGCGGCCTGGTGCTCTTCGTCGGCGGCACCGGCT
CGGGCAAGTCCACTTCCCTGGCGGCCCTGATCGACCACCGCAACCGCAATAGCGGCGGCCACATCATCACCATCGAAGAC
CCCATCGAGTACGTGCACCGGCACCGCAAGTCGATCATCAACCAGCGCGAGGTGGGCGTGGATACCCGCAGCTTCCATGC
CGCGTTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCCTGATCGGCGAGATCCGCGACCGCGAGACCATGGAGCACG
CCCTGGCCTTCGCCGATACCGGCCACCTGGCGATCTCCACGCTGCACGCCAACAACGCGAACCAGGCGCTGGACCGCATC
ATCAACTTCTTCCCCGAGGAGCGCCGGCCACAGCTGCTCAACGACCTGGGCAACAACCTCAAGGCCTTCGTTTCCCAGCG
CCTGGTGCGCACCCAGGACGGCAAGCGCCGCGCGGCAGTGGAAGTGCTGCTGGGCACGGCGACCATCAGCGACATCATCA
AGCGCGGCGACTTCAGTTCGATCAAGGAGATCATGGACAAGTCCCGTGCCCTGGGCATGCAGACCTTCGACCAGGCGCTG
TTCGACCTGGCGGTGGAAGGAGCGATCACCGAGGAAGAGGCGGTGAAGAACGCCGACTCGGCGAACAACCTGCGACTGAA
GCTCAAGCTGTACAAGGACAACCCGGGCAGCGTCGGCAGCACTGCCACCCCCGCGGCCGCCAAGCCGGCCGCCCCGGCGC
CGGTTGCTCCGCCGCCGGCCACCCAGCCGGTCGAAGCTTCCAGCTGGGGGCTGGAACTCGCTCTAGAGGAAATCGAGGCG
GAAGACGCCGAGAAGCCGGGCGGGCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (113-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	56.303	87.286	0.491
pilU	Acinetobacter baylyi ADP1	53.409	86.064	0.46
pilU	Vibrio cholerae strain A1552	50.139	88.264	0.443
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.386	95.599	0.377