Detailed information NTG0423368

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BAMOH1_RS12625
• Genome accession: NZ_CP061853
• Coordinates: 2632745..2633350 (-)
• Length: 201 a.a.
• NCBI ID: WP_003152683.1
• Uniprot ID: A7Z769
• Organism: Bacillus amyloliquefaciens strain MOH1-5b
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2627745..2638350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMOH1_RS12590 (BAMOH1_12590)	-	2627757..2628413 (-)	657	WP_095061077.1	DUF421 domain-containing protein	-
BAMOH1_RS12595 (BAMOH1_12595)	-	2628580..2628966 (+)	387	WP_003152697.1	TIGR04086 family membrane protein	-
BAMOH1_RS12600 (BAMOH1_12600)	yajC	2629019..2629279 (-)	261	WP_007408187.1	preprotein translocase subunit YajC	-
BAMOH1_RS12605 (BAMOH1_12605)	tgt	2629310..2630455 (-)	1146	WP_014305500.1	tRNA guanosine(34) transglycosylase Tgt	-
BAMOH1_RS12610 (BAMOH1_12610)	queA	2630483..2631511 (-)	1029	WP_022552886.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BAMOH1_RS12615 (BAMOH1_12615)	-	2631537..2631737 (-)	201	WP_003152687.1	DUF2905 domain-containing protein	-
BAMOH1_RS12620 (BAMOH1_12620)	ruvB	2631730..2632734 (-)	1005	WP_003152685.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BAMOH1_RS12625 (BAMOH1_12625)	ruvA	2632745..2633350 (-)	606	WP_003152683.1	Holliday junction branch migration protein RuvA	Machinery gene
BAMOH1_RS12630 (BAMOH1_12630)	-	2633485..2633994 (-)	510	WP_012118093.1	intercompartmental signaling factor BofC	-
BAMOH1_RS19640	-	2634127..2634246 (-)	120	WP_022552885.1	hypothetical protein	-
BAMOH1_RS12635 (BAMOH1_12635)	-	2634379..2634972 (-)	594	WP_038461552.1	YhcN/YlaJ family sporulation lipoprotein	-
BAMOH1_RS12640 (BAMOH1_12640)	safA	2635120..2636310 (-)	1191	WP_014418537.1	SafA/ExsA family spore coat assembly protein	-
BAMOH1_RS12645 (BAMOH1_12645)	nadA	2636438..2637541 (-)	1104	WP_061862437.1	quinolinate synthase NadA	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22414.85 Da
• Isoelectric Point: 5.1597

>NTDB_id=423368 BAMOH1_RS12625 WP_003152683.1 2632745..2633350(-) (ruvA) [Bacillus amyloliquefaciens strain MOH1-5b]
MIEFVKGTIDYVSPQYIVIENGGIGYQVFTPNPFIYKVSNQETIFTYHHIKEDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIEAIEQEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIDNLFNHEARIEKQEAETALDEAL
EALRVLGYAEKEIKKVLPHLKEETALSTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=423368 BAMOH1_RS12625 WP_003152683.1 2632745..2633350(-) (ruvA) [Bacillus amyloliquefaciens strain MOH1-5b]
GTGATTGAATTCGTGAAGGGGACGATTGATTACGTATCTCCCCAATACATCGTGATTGAAAACGGCGGAATCGGCTATCA
GGTCTTCACTCCGAATCCGTTTATTTATAAGGTAAGCAATCAAGAGACCATTTTTACGTATCATCATATAAAAGAAGACG
CCTTTTCTTTGTACGGTTTTTCAACCCGGGAAGAAAAAGCGCTTTTCACAAAGCTGCTGAACGTCACCGGCATCGGGCCT
AAAGGGGCGCTCGCCATCCTCGGTTCCGGTGATCCCGGAGCCGTCATCGAAGCGATCGAACAGGAAGACGAAGCCTTTTT
GGTGAAATTTCCGGGTGTGGGCAAAAAAACGGCGCGGCAGATTATTCTTGATTTGAAAGGCAAACTGGCCGACGTCGTGC
CTGAAATGATTGACAACCTGTTCAATCATGAAGCGCGCATTGAAAAACAAGAGGCTGAAACGGCGCTTGACGAGGCGCTT
GAAGCGCTCCGGGTTCTCGGCTACGCCGAAAAAGAAATTAAAAAAGTGCTTCCTCACTTAAAAGAGGAAACGGCGCTTTC
AACAGATCAATATGTGAAAAAAGCATTGCAAAAATTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: A7Z769

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	92.537	100	0.925
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408