Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | G0028_RS01445 | Genome accession | NZ_CP048659 |
| Coordinates | 296108..296635 (+) | Length | 175 a.a. |
| NCBI ID | WP_130074428.1 | Uniprot ID | - |
| Organism | Acinetobacter piscicola strain YH12207_T | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 291108..301635
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0028_RS01430 (G0028_01430) | pilM | 293612..294670 (+) | 1059 | WP_130074425.1 | pilus assembly protein PilM | Machinery gene |
| G0028_RS01435 (G0028_01435) | pilN | 294670..295302 (+) | 633 | WP_130074426.1 | PilN domain-containing protein | Machinery gene |
| G0028_RS01440 (G0028_01440) | - | 295299..295962 (+) | 664 | Protein_278 | type 4a pilus biogenesis protein PilO | - |
| G0028_RS01445 (G0028_01445) | pilP | 296108..296635 (+) | 528 | WP_130074428.1 | pilus assembly protein PilP | Machinery gene |
| G0028_RS01450 (G0028_01450) | pilQ | 296652..298817 (+) | 2166 | WP_180044974.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| G0028_RS01455 (G0028_01455) | aroK | 298854..299396 (+) | 543 | WP_130074430.1 | shikimate kinase AroK | - |
| G0028_RS01460 (G0028_01460) | aroB | 299422..300501 (+) | 1080 | WP_130074431.1 | 3-dehydroquinate synthase | - |
| G0028_RS01465 (G0028_01465) | - | 300515..301384 (+) | 870 | WP_174493483.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19453.44 Da Isoelectric Point: 6.3736
>NTDB_id=422149 G0028_RS01445 WP_130074428.1 296108..296635(+) (pilP) [Acinetobacter piscicola strain YH12207_T]
MNLFKLISGLSLAVLLVGCDSRIDAVNQQMAEIRNQPPLPIEPAPTFEPVPSFNYSAQQLRSPFLPSSLANELKIMSGKR
VYPNFSRQPQPLESYALETLSFKGSMKSNSGQIVGLIQTPDREVERVQIGNYLGMNQGRIISITPTRIDLLEIIPDGRDG
YIERPRSLVLIGQLD
MNLFKLISGLSLAVLLVGCDSRIDAVNQQMAEIRNQPPLPIEPAPTFEPVPSFNYSAQQLRSPFLPSSLANELKIMSGKR
VYPNFSRQPQPLESYALETLSFKGSMKSNSGQIVGLIQTPDREVERVQIGNYLGMNQGRIISITPTRIDLLEIIPDGRDG
YIERPRSLVLIGQLD
Nucleotide
Download Length: 528 bp
>NTDB_id=422149 G0028_RS01445 WP_130074428.1 296108..296635(+) (pilP) [Acinetobacter piscicola strain YH12207_T]
ATGAATTTATTTAAATTAATCAGTGGACTCTCTCTTGCTGTTTTATTGGTTGGATGTGATTCACGTATTGATGCAGTCAA
TCAACAAATGGCAGAAATTCGAAATCAACCGCCATTACCGATTGAACCTGCGCCGACTTTTGAGCCTGTGCCAAGCTTTA
ACTATTCTGCTCAACAATTACGCAGCCCATTTCTACCGAGTTCATTGGCAAATGAATTGAAAATTATGTCAGGGAAGCGT
GTGTATCCAAACTTCTCAAGACAGCCACAACCTTTAGAAAGTTATGCACTTGAAACCTTAAGTTTTAAAGGCAGTATGAA
ATCAAATTCAGGGCAAATCGTGGGTCTAATTCAAACACCTGATAGAGAAGTAGAACGTGTGCAAATAGGCAACTATTTGG
GAATGAATCAGGGGCGAATTATTTCAATCACTCCGACACGAATTGATTTATTAGAGATTATACCTGACGGGCGTGATGGT
TATATTGAACGACCACGTAGTCTAGTCTTGATTGGTCAGTTAGATTGA
ATGAATTTATTTAAATTAATCAGTGGACTCTCTCTTGCTGTTTTATTGGTTGGATGTGATTCACGTATTGATGCAGTCAA
TCAACAAATGGCAGAAATTCGAAATCAACCGCCATTACCGATTGAACCTGCGCCGACTTTTGAGCCTGTGCCAAGCTTTA
ACTATTCTGCTCAACAATTACGCAGCCCATTTCTACCGAGTTCATTGGCAAATGAATTGAAAATTATGTCAGGGAAGCGT
GTGTATCCAAACTTCTCAAGACAGCCACAACCTTTAGAAAGTTATGCACTTGAAACCTTAAGTTTTAAAGGCAGTATGAA
ATCAAATTCAGGGCAAATCGTGGGTCTAATTCAAACACCTGATAGAGAAGTAGAACGTGTGCAAATAGGCAACTATTTGG
GAATGAATCAGGGGCGAATTATTTCAATCACTCCGACACGAATTGATTTATTAGAGATTATACCTGACGGGCGTGATGGT
TATATTGAACGACCACGTAGTCTAGTCTTGATTGGTCAGTTAGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
77.301 |
93.143 |
0.72 |
| comL | Acinetobacter baylyi ADP1 |
74.85 |
95.429 |
0.714 |