Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | G0028_RS01435 | Genome accession | NZ_CP048659 |
| Coordinates | 294670..295302 (+) | Length | 210 a.a. |
| NCBI ID | WP_130074426.1 | Uniprot ID | - |
| Organism | Acinetobacter piscicola strain YH12207_T | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 289670..300302
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0028_RS01425 (G0028_01425) | ponA | 290877..293450 (-) | 2574 | WP_174493486.1 | penicillin-binding protein PBP1a | - |
| G0028_RS01430 (G0028_01430) | pilM | 293612..294670 (+) | 1059 | WP_130074425.1 | pilus assembly protein PilM | Machinery gene |
| G0028_RS01435 (G0028_01435) | pilN | 294670..295302 (+) | 633 | WP_130074426.1 | PilN domain-containing protein | Machinery gene |
| G0028_RS01440 (G0028_01440) | - | 295299..295962 (+) | 664 | Protein_278 | type 4a pilus biogenesis protein PilO | - |
| G0028_RS01445 (G0028_01445) | pilP | 296108..296635 (+) | 528 | WP_130074428.1 | pilus assembly protein PilP | Machinery gene |
| G0028_RS01450 (G0028_01450) | pilQ | 296652..298817 (+) | 2166 | WP_180044974.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| G0028_RS01455 (G0028_01455) | aroK | 298854..299396 (+) | 543 | WP_130074430.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23499.86 Da Isoelectric Point: 5.4403
>NTDB_id=422148 G0028_RS01435 WP_130074426.1 294670..295302(+) (pilN) [Acinetobacter piscicola strain YH12207_T]
MAKINLLPWREELREQRKKQFVAISIGIAVLGFIIVLLAWMYFNQRLDDQEQANQLVTSTNQNLDTQLKTLDGLQEQRNA
IIERMKLIQGLQGQRPVTVRLVDELVRVVPPAMYITKFSRTGDKFTIEGKAESPNTVADFLRGLEASEWYRNAFMNSFLA
AEENKNKPATSVVPRAEESYGSFVVSVDIGEIAQAAKPDAEQAQAAGGAK
MAKINLLPWREELREQRKKQFVAISIGIAVLGFIIVLLAWMYFNQRLDDQEQANQLVTSTNQNLDTQLKTLDGLQEQRNA
IIERMKLIQGLQGQRPVTVRLVDELVRVVPPAMYITKFSRTGDKFTIEGKAESPNTVADFLRGLEASEWYRNAFMNSFLA
AEENKNKPATSVVPRAEESYGSFVVSVDIGEIAQAAKPDAEQAQAAGGAK
Nucleotide
Download Length: 633 bp
>NTDB_id=422148 G0028_RS01435 WP_130074426.1 294670..295302(+) (pilN) [Acinetobacter piscicola strain YH12207_T]
ATGGCAAAGATTAATTTACTCCCATGGCGTGAAGAACTAAGAGAACAACGAAAAAAGCAATTTGTTGCGATTAGTATTGG
AATCGCTGTATTGGGGTTTATCATCGTATTATTGGCTTGGATGTATTTTAATCAAAGATTAGATGATCAAGAACAAGCAA
ATCAATTGGTTACTAGCACTAATCAGAACTTGGATACGCAATTAAAAACATTAGATGGTTTGCAAGAACAGCGTAATGCG
ATTATTGAACGTATGAAACTAATTCAAGGTTTACAAGGGCAGCGTCCTGTAACTGTGCGTTTAGTGGATGAGTTAGTTCG
TGTTGTACCACCTGCAATGTATATCACTAAATTTAGTCGGACTGGAGATAAGTTTACCATTGAAGGTAAAGCAGAAAGTC
CAAATACGGTCGCAGATTTTTTACGTGGTTTAGAAGCATCAGAATGGTATCGAAATGCCTTCATGAATTCATTCTTGGCG
GCAGAAGAAAACAAAAATAAACCAGCGACTTCGGTTGTCCCGAGAGCTGAAGAATCTTATGGAAGTTTTGTTGTGAGTGT
GGATATCGGGGAAATTGCACAAGCGGCGAAACCTGATGCAGAACAAGCACAAGCAGCTGGAGGTGCTAAATGA
ATGGCAAAGATTAATTTACTCCCATGGCGTGAAGAACTAAGAGAACAACGAAAAAAGCAATTTGTTGCGATTAGTATTGG
AATCGCTGTATTGGGGTTTATCATCGTATTATTGGCTTGGATGTATTTTAATCAAAGATTAGATGATCAAGAACAAGCAA
ATCAATTGGTTACTAGCACTAATCAGAACTTGGATACGCAATTAAAAACATTAGATGGTTTGCAAGAACAGCGTAATGCG
ATTATTGAACGTATGAAACTAATTCAAGGTTTACAAGGGCAGCGTCCTGTAACTGTGCGTTTAGTGGATGAGTTAGTTCG
TGTTGTACCACCTGCAATGTATATCACTAAATTTAGTCGGACTGGAGATAAGTTTACCATTGAAGGTAAAGCAGAAAGTC
CAAATACGGTCGCAGATTTTTTACGTGGTTTAGAAGCATCAGAATGGTATCGAAATGCCTTCATGAATTCATTCTTGGCG
GCAGAAGAAAACAAAAATAAACCAGCGACTTCGGTTGTCCCGAGAGCTGAAGAATCTTATGGAAGTTTTGTTGTGAGTGT
GGATATCGGGGAAATTGCACAAGCGGCGAAACCTGATGCAGAACAAGCACAAGCAGCTGGAGGTGCTAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70.892 |
100 |
0.719 |
| comN | Acinetobacter baylyi ADP1 |
68.72 |
100 |
0.69 |