Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   G0027_RS07155 Genome accession   NZ_CP048654
Coordinates   1500636..1501778 (+) Length   380 a.a.
NCBI ID   WP_005181456.1    Uniprot ID   A0A7V8P956
Organism   Acinetobacter indicus strain C15_T     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1495636..1506778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0027_RS07135 (G0027_07140) - 1496198..1498231 (-) 2034 WP_168414947.1 TonB-dependent copper receptor -
  G0027_RS07140 (G0027_07145) - 1498305..1498727 (-) 423 WP_016658991.1 DUF2946 family protein -
  G0027_RS07145 (G0027_07150) def 1498818..1499342 (-) 525 WP_005181462.1 peptide deformylase -
  G0027_RS07150 (G0027_07155) tsaP 1499462..1500619 (+) 1158 WP_163143169.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  G0027_RS07155 (G0027_07160) dprA 1500636..1501778 (+) 1143 WP_005181456.1 DNA-processing protein DprA Machinery gene
  G0027_RS07160 (G0027_07165) - 1501823..1502389 (+) 567 WP_127800662.1 L-threonylcarbamoyladenylate synthase -
  G0027_RS07165 (G0027_07170) - 1502770..1503681 (-) 912 WP_163143172.1 DMT family transporter -
  G0027_RS07170 (G0027_07175) - 1504010..1504552 (+) 543 WP_005181445.1 glutathione peroxidase -
  G0027_RS07175 (G0027_07180) - 1504735..1505343 (+) 609 WP_127800678.1 hypothetical protein -
  G0027_RS07180 (G0027_07185) - 1505464..1506462 (+) 999 WP_127801790.1 pirin family protein -

Sequence


Protein


Download         Length: 380 a.a.        Molecular weight: 42136.98 Da        Isoelectric Point: 6.9756

>NTDB_id=422125 G0027_RS07155 WP_005181456.1 1500636..1501778(+) (dprA) [Acinetobacter indicus strain C15_T]
MLNTISPGHLATIRLWYLVQHSLPSFYKLIRHFGSAAAATEAGNLQRWAELGLHQNHLQRARDFHQAQAQADFQHLLQRV
QQHTDFILIPEDVGYPTQLLPYTDKPPILFGQGQAQPLLQPQVAIVGSRKASPHGRQVAYDFAYYLSEKGFFINSGLAQG
IDEAAHQGGLKHQRTIAVMGTGLDLTYPATHQGLRDQILQRHGTIISEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAT
LDSGSLITAKLAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWLSQQQATLSATASAAAHPT
LPEHLLALYSQLDWVGKNMDQLASELQQETAHLTAQLMELELLGMAMQQSGLYLRCRPSQ

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=422125 G0027_RS07155 WP_005181456.1 1500636..1501778(+) (dprA) [Acinetobacter indicus strain C15_T]
ATGCTGAATACGATATCACCCGGTCATCTCGCAACGATTCGCCTGTGGTATCTGGTTCAGCATTCACTCCCCAGCTTTTA
TAAATTAATTCGGCACTTCGGTTCGGCCGCTGCGGCCACCGAAGCCGGCAACCTGCAGCGCTGGGCAGAACTGGGACTGC
ATCAGAACCATCTGCAACGCGCACGGGATTTTCATCAAGCACAGGCACAAGCCGACTTCCAGCACTTGCTGCAGCGCGTC
CAGCAACATACCGATTTTATTCTTATTCCCGAAGATGTCGGTTACCCCACCCAACTGCTGCCCTATACCGACAAGCCACC
AATTTTATTTGGCCAAGGACAGGCACAACCTTTACTTCAGCCGCAAGTGGCAATTGTCGGCAGTCGCAAAGCCAGTCCGC
ATGGCCGGCAGGTGGCTTATGACTTTGCCTATTATTTAAGTGAAAAAGGCTTTTTTATTAACAGTGGCCTGGCGCAAGGC
ATTGATGAAGCAGCCCATCAGGGTGGCTTGAAACATCAACGTACCATTGCCGTGATGGGTACTGGTCTCGACCTCACCTA
CCCGGCCACACACCAGGGTCTGCGTGACCAGATTCTGCAACGGCATGGCACTATTATCAGTGAGTTCCTGCCACAGACCA
AACCGCTACAGCAGCATTTTCCACGGCGTAACCGCATTGTCAGTGGACTTAGCCTGGGAGTGATTGTAGCCGAAGCCACG
CTGGACAGCGGCTCGCTGATTACCGCCAAACTGGCGGCCGAGCAAGGTAAAACCGTGTTTGCCATTCCGGGACATATTTA
CAGTGAATTTCATCAGGGCTGCCATCAACTGATTCGGGAAGGCGCGATTCTGGTTGATCATCCGGAACAGGTCATTGAAG
ATCTGGCCTTGCCAACCCAATGGCTGAGCCAGCAGCAGGCGACCTTATCCGCTACAGCATCTGCAGCTGCCCACCCGACC
TTACCCGAACATCTGTTGGCCCTATACAGCCAGCTGGACTGGGTCGGTAAAAATATGGACCAGCTGGCCAGCGAACTGCA
ACAGGAAACCGCCCATTTAACCGCGCAGTTAATGGAACTGGAGCTGCTCGGAATGGCAATGCAGCAATCGGGGCTATATC
TGCGTTGTCGTCCATCACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V8P956

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

69.761

99.211

0.692

  dprA Acinetobacter baumannii D1279779

69.496

99.211

0.689

  dprA Acinetobacter baylyi ADP1

64.211

100

0.642

  dprA Vibrio cholerae strain A1552

42.857

88.421

0.379


Multiple sequence alignment